Francis Ka Ming Chan PHD
Title Associate Professor
Institution University of Massachusetts Medical School
Department Pathology
Division Academic Pathology
Address University of Massachusetts Medical School
55 Lake Avenue North
Worcester MA 01655
Telephone 508-856-1664
Email
Other Positions
Institution UMMS - Graduate School of Biomedical Sciences
Department Immunology & Virology

Institution UMMS - Graduate School of Biomedical Sciences
Department Interdisciplinary Graduate Program

Institution UMMS - Programs, Centers and Institutes
Department Center for AIDS Research
Narrative

Academic Background

Education:

1991 B.A. University of California, San Diego (Summa Cum Laude)
1996 Ph.D. University of California, Berkeley
Dr. Francis Chan

The Role of Programmed Cell Death in Immune Functions and Diseases

Cell death plays an essential role in metazoan homeostasis.  Members of the tumor necrosis factor (TNF) and TNF receptor (TNFR) family are crucial regulators of cell death.  Our lab is interested in how cell death contributes to the induction of immune responses.  One of the ways by which cell death can modulate immune responses is through the induction of programmed necrosis.  Necrotic cell death is distinguished from apoptosis by extensive cell and organelle swelling, the early rupture of plasma membrane, and the lack of caspase activation.   The release of endogenous cellular adjuvants can cause inflammation and stimulate immune responses.   Our long-term goal is to understand the biochemical regulation of programmed necrosis and the role programmed necrosis plays in inflammation, virus infections, autoimmune diseases and cancers.

Current projects:

1. Molecular regulation of programmed necrosis

Using RNA interference, we have recently identified several kinases including RIP1 and RIP3 that critically regulate programmed necrosis.  We show that a pro-necrotic signaling complex containing RIP1 and RIP3 are critically required for the induction of programmed necrosis.  We are currently investigating how the assembly of this RIP1-RIP3 complex is regulated.  Moreover, we are interested in identifying the downstream substrates for the RIP1-RIP3 kinase complex, and the effector mechanism that causes necrotic cell injury.

2. Programmed necrosis in anti-viral immunity

One of the physiological situations in which necrosis plays an important role is during viral infections.  Using vaccinia virus infections in mice as models, we have demonstrated a critical role for RIP3-dependent programmed necrosis in virus-induced inflammation and innate immune responses.  We are currently examining whether programmed necrosis and the subsequent inflammation it causes may also impact the induction of adaptive immune responses.  In addition, we are evaluating the role of programmed necrosis in other virus infections. 

3. How do viruses inhibit host cell death?

Inhibition of host cell death is widely touted as an immune evasion strategy employed by viruses.  In support of this hypothesis, many viruses encode inhibitors against the host cell death machinery.  We have recently identified several classes of viral inhibitors that potently inhibits programmed necrosis.   One of the challenges in the future will be to identify the molecular mechanisms by which viral inhibitors modulate the pro-necrotic signaling pathway.

4. Regulation of TRAIL signaling in immune cells

TRAIL (TNF-related apoptosis inducing ligand) is a TNF-like cytokine with potent cytotoxicity against many tumor cells, but are generally non-toxic to normal cells.  Of the five identified TRAIL receptors, two are termed “decoys” due to their ability to negatively regulate the apoptotic function of other TRAIL receptors.  We have found that signaling by TRAIL is in part regulated at the level of assembly of “pre-ligand complexes” between death receptors and the decoy receptors.  Current and future efforts will focus on understanding how the assembly of different TRAIL receptor complexes regulates death and non-death signaling in immune cells and cancer cells.

 Figure 1

 

Figure 1: Electron micrograph of a vaccinia virus infected cell undergoing programmed necrosis.  Note that the dying cell exhibits extensive intracellular vacuolation and mitochondrial swelling.

 Figure 2

 

Figure 2: Electron micrograph of a necrotic cell exhibiting extensive loss of plasma membrane integrity.  

 

Figure 3

Figure 3: A cartoon representation of how necrotic cell injury can trigger inflammation and stimulation immune responses during virus infections.

Publications
1. Ren SX, Shen J, Cheng AS, Lu L, Chan RL, Li ZJ, Wang XJ, Wong CC, Zhang L, Ng SS, Chan FL, Chan FK, Yu J, Sung JJ, Wu WK, Cho CH. FK-16 Derived from the Anticancer Peptide LL-37 Induces Caspase-Independent Apoptosis and Autophagic Cell Death in Colon Cancer Cells. PLoS One. 2013; 8(5):e63641.
  View in: PubMed
 
2. Wong MC, Hirai HW, Luk AK, Lam TY, Ching JY, Griffiths SM, Chan FK, Sung JJ. The Knowledge of Colorectal Cancer Symptoms and Risk Factors among 10,078 Screening Participants: Are High Risk Individuals More Knowledgeable? PLoS One. 2013; 8(4):e60366.
  View in: PubMed
 
3. Wu CW, Dong YJ, Liang QY, He XQ, Ng SS, Chan FK, Sung JJ, Yu J. MicroRNA-18a Attenuates DNA Damage Repair through Suppressing the Expression of Ataxia Telangiectasia Mutated in Colorectal Cancer. PLoS One. 2013; 8(2):e57036.
  View in: PubMed
 
4. Chan FK, Moriwaki K, De Rosa MJ. Detection of necrosis by release of lactate dehydrogenase activity. Methods Mol Biol. 2013; 979:65-70.
  View in: PubMed
 
5. Kim CK, Toft JE, Papenfus M, Verutes G, Guerry AD, Ruckelshaus MH, Arkema KK, Guannel G, Wood SA, Bernhardt JR, Tallis H, Plummer ML, Halpern BS, Pinsky ML, Beck MW, Chan F, Chan KM, Levin PS, Polasky S. Catching the right wave: evaluating wave energy resources and potential compatibility with existing marine and coastal uses. PLoS One. 2012; 7(11):e47598.
  View in: PubMed
 
6. Chan FK. Fueling the flames: Mammalian programmed necrosis in inflammatory diseases. Cold Spring Harb Perspect Biol. 2012; 4(11).
  View in: PubMed
 
7. Ren SX, Cheng AS, To KF, Tong JH, Li MS, Shen J, Wong CC, Zhang L, Chan RL, Wang XJ, Ng SS, Chiu LC, Marquez VE, Gallo RL, Chan FK, Yu J, Sung JJ, Wu WK, Cho CH. Host Immune Defense Peptide LL-37 Activates Caspase-Independent Apoptosis and Suppresses Colon Cancer. Cancer Res. 2012 Dec 15; 72(24):6512-23.
  View in: PubMed
 
8. Li J, McQuade T, Siemer AB, Napetschnig J, Moriwaki K, Hsiao YS, Damko E, Moquin D, Walz T, McDermott A, Chan FK, Wu H. The RIP1/RIP3 Necrosome Forms a Functional Amyloid Signaling Complex Required for Programmed Necrosis. Cell. 2012 Jul 20; 150(2):339-50.
  View in: PubMed
 
9. Wu YC, Wang XJ, Yu L, Chan FK, Cheng AS, Yu J, Sung JJ, Wu WK, Cho CH. Hydrogen sulfide lowers proliferation and induces protective autophagy in colon epithelial cells. PLoS One. 2012; 7(5):e37572.
  View in: PubMed
 
10. Chan FK, Baehrecke EH. RIP3 Finds Partners in Crime. Cell. 2012 Jan 20; 148(1-2):17-8.
  View in: PubMed
 
11. Fortes GB, Alves LS, de Oliveira R, Dutra FF, Rodrigues D, Fernandez PL, Souto-Padron T, De Rosa MJ, Kelliher M, Golenbock D, Chan FK, Bozza MT. Heme induces programmed necrosis on macrophages through autocrine TNF and ROS production. Blood. 2012 Mar 8; 119(10):2368-75.
  View in: PubMed
 
12. Cho Y, McQuade T, Zhang H, Zhang J, Chan FK. RIP1-Dependent and Independent Effects of Necrostatin-1 in Necrosis and T Cell Activation. PLoS One. 2011; 6(8):e23209.
  View in: PubMed
 
13. Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ. Energy starved candidatus pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. PLoS One. 2011; 6(5):e19725.
  View in: PubMed
 
14. Zhang H, Zhou X, McQuade T, Li J, Chan FK, Zhang J. Functional complementation between FADD and RIP1 in embryos and lymphocytes. Nature. 2011 Mar 17; 471(7338):373-6.
  View in: PubMed
 
15. Cho Y, Challa S, Chan FK. A RNA Interference Screen Identifies RIP3 as an Essential Inducer of TNF-Induced Programmed Necrosis. Adv Exp Med Biol. 2011; 691:589-93.
  View in: PubMed
 
16. Challa S, Woelfel M, Guildford M, Moquin D, Chan FK. Viral cell death inhibitor MC159 enhances innate immunity against vaccinia virus infection. J Virol. 2010 Oct; 84(20):10467-76.
  View in: PubMed
 
17. Challa S, Chan FK. Going up in flames: necrotic cell injury and inflammatory diseases. Cell Mol Life Sci. 2010 Oct; 67(19):3241-53.
  View in: PubMed
 
18. Cho YS, Challa S, Clancy L, Chan FK. Lipopolysaccharide-induced expression of TRAIL promotes dendritic cell differentiation. Immunology. 2010 Aug; 130(4):504-15.
  View in: PubMed
 
19. Cho YS, Park SY, Shin HS, Chan FK. Physiological consequences of programmed necrosis, an alternative form of cell demise. Mol Cells. 2010 Apr; 29(4):327-32.
  View in: PubMed
 
20. Moquin D, Chan FK. The molecular regulation of programmed necrotic cell injury. Trends Biochem Sci. 2010 Aug; 35(8):434-41.
  View in: PubMed
 
21. Liu X, Wang X, Zhang J, Lam EK, Shin VY, Cheng AS, Yu J, Chan FK, Sung JJ, Jin HC. Warburg effect revisited: an epigenetic link between glycolysis and gastric carcinogenesis. Oncogene. 2010 Jan 21; 29(3):442-50.
  View in: PubMed
 
22. Cho YS, Challa S, Moquin D, Genga R, Ray TD, Guildford M, Chan FK. Phosphorylation-driven assembly of the RIP1-RIP3 complex regulates programmed necrosis and virus-induced inflammation. Cell. 2009 Jun 12; 137(6):1112-23.
  View in: PubMed
 
23. Wang LJ, Jin HC, Wang X, Lam EK, Zhang JB, Liu X, Chan FK, Si JM, Sung JJ. ZIC1 is downregulated through promoter hypermethylation in gastric cancer. Biochem Biophys Res Commun. 2009 Feb 20; 379(4):959-63.
  View in: PubMed
 
24. Cheng YY, Yu J, Wong YP, Man EP, To KF, Jin VX, Li J, Tao Q, Sung JJ, Chan FK, Leung WK. Frequent epigenetic inactivation of secreted frizzled-related protein 2 (SFRP2) by promoter methylation in human gastric cancer. Br J Cancer. 2007 Oct 8; 97(7):895-901.
  View in: PubMed
 
25. Chan FK. Three is better than one: pre-ligand receptor assembly in the regulation of TNF receptor signaling. Cytokine. 2007 Feb; 37(2):101-7.
  View in: PubMed
 
26. Woelfel M, Bixby J, Brehm MA, Chan FK. Transgenic expression of the viral FLIP MC159 causes lpr/gld-like lymphoproliferation and autoimmunity. J Immunol. 2006 Sep 15; 177(6):3814-20.
  View in: PubMed
 
27. Leung DT, van Maren WW, Chan FK, Chan WS, Lo AW, Ma CH, Tam FC, To KF, Chan PK, Sung JJ, Lim PL. Extremely low exposure of a community to severe acute respiratory syndrome coronavirus: false seropositivity due to use of bacterially derived antigens. J Virol. 2006 Sep; 80(18):8920-8.
  View in: PubMed
 
28. Sedger LM, Osvath SR, Xu XM, Li G, Chan FK, Barrett JW, McFadden G. Poxvirus tumor necrosis factor receptor (TNFR)-like T2 proteins contain a conserved preligand assembly domain that inhibits cellular TNFR1-induced cell death. J Virol. 2006 Sep; 80(18):9300-9.
  View in: PubMed
 
29. Zheng L, Bidere N, Staudt D, Cubre A, Orenstein J, Chan FK, Lenardo M. Competitive control of independent programs of tumor necrosis factor receptor-induced cell death by TRADD and RIP1. Mol Cell Biol. 2006 May; 26(9):3505-13.
  View in: PubMed
 
30. Clancy L, Mruk K, Archer K, Woelfel M, Mongkolsapaya J, Screaton G, Lenardo MJ, Chan FK. Preligand assembly domain-mediated ligand-independent association between TRAIL receptor 4 (TR4) and TR2 regulates TRAIL-induced apoptosis. Proc Natl Acad Sci U S A. 2005 Dec 13; 102(50):18099-104.
  View in: PubMed
 
31. Deng GM, Zheng L, Chan FK, Lenardo M. Amelioration of inflammatory arthritis by targeting the pre-ligand assembly domain of tumor necrosis factor receptors. Nat Med. 2005 Oct; 11(10):1066-72.
  View in: PubMed
 
32. Chan FK, Holmes KL. Flow cytometric analysis of fluorescence resonance energy transfer: a tool for high-throughput screening of molecular interactions in living cells. Methods Mol Biol. 2004; 263:281-92.
  View in: PubMed
 
33. Chan FK. Monitoring molecular interactions in living cells using flow cytometric analysis of fluorescence resonance energy transfer. Methods Mol Biol. 2004; 261:371-82.
  View in: PubMed
 
34. Chan FK, Shisler J, Bixby JG, Felices M, Zheng L, Appel M, Orenstein J, Moss B, Lenardo MJ. A role for tumor necrosis factor receptor-2 and receptor-interacting protein in programmed necrosis and antiviral responses. J Biol Chem. 2003 Dec 19; 278(51):51613-21.
  View in: PubMed
 
35. Chan FK, Siegel RM, Zacharias D, Swofford R, Holmes KL, Tsien RY, Lenardo MJ. Fluorescence resonance energy transfer analysis of cell surface receptor interactions and signaling using spectral variants of the green fluorescent protein. Cytometry. 2001 Aug 1; 44(4):361-8.
  View in: PubMed
 
36. Siegel RM, Chan FK, Chun HJ, Lenardo MJ. The multifaceted role of Fas signaling in immune cell homeostasis and autoimmunity. Nat Immunol. 2000 Dec; 1(6):469-74.
  View in: PubMed
 
37. Chan FK. The pre-ligand binding assembly domain: a potential target of inhibition of tumour necrosis factor receptor function. Ann Rheum Dis. 2000 Nov; 59 Suppl 1:i50-3.
  View in: PubMed
 
38. Chan FK, Chun HJ, Zheng L, Siegel RM, Bui KL, Lenardo MJ. A domain in TNF receptors that mediates ligand-independent receptor assembly and signaling. Science. 2000 Jun 30; 288(5475):2351-4.
  View in: PubMed
 
39. Siegel RM, Frederiksen JK, Zacharias DA, Chan FK, Johnson M, Lynch D, Tsien RY, Lenardo MJ. Fas preassociation required for apoptosis signaling and dominant inhibition by pathogenic mutations. Science. 2000 Jun 30; 288(5475):2354-7.
  View in: PubMed
 
40. Siegel RM, Chan FK, Zacharias DA, Swofford R, Holmes KL, Tsien RY, Lenardo MJ. Measurement of molecular interactions in living cells by fluorescence resonance energy transfer between variants of the green fluorescent protein. Sci STKE. 2000 Jun 27; 2000(38):pl1.
  View in: PubMed
 
41. Chan FK, Lenardo MJ. A crucial role for p80 TNF-R2 in amplifying p60 TNF-R1 apoptosis signals in T lymphocytes. Eur J Immunol. 2000 Feb; 30(2):652-60.
  View in: PubMed
 
42. Wang J, Zheng L, Lobito A, Chan FK, Dale J, Sneller M, Yao X, Puck JM, Straus SE, Lenardo MJ. Inherited human Caspase 10 mutations underlie defective lymphocyte and dendritic cell apoptosis in autoimmune lymphoproliferative syndrome type II. Cell. 1999 Jul 9; 98(1):47-58.
  View in: PubMed
 
43. Brunner MC, Chambers CA, Chan FK, Hanke J, Winoto A, Allison JP. CTLA-4-Mediated inhibition of early events of T cell proliferation. J Immunol. 1999 May 15; 162(10):5813-20.
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44. Chan FK, Chen A, Winoto A. Thymic expression of the transcription factor Nur77 rescues the T cell but not the B cell abnormality of gld/gld mice. J Immunol. 1998 Oct 15; 161(8):4252-6.
  View in: PubMed
 
45. Cheng LE, Chan FK, Cado D, Winoto A. Functional redundancy of the Nur77 and Nor-1 orphan steroid receptors in T-cell apoptosis. EMBO J. 1997 Apr 15; 16(8):1865-75.
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46. Calnan BJ, Szychowski S, Chan FK, Cado D, Winoto A. A role for the orphan steroid receptor Nur77 in apoptosis accompanying antigen-induced negative selection. Immunity. 1995 Sep; 3(3):273-82.
  View in: PubMed
 
47. Chan FK, Zhang J, Cheng L, Shapiro DN, Winoto A. Identification of human and mouse p19, a novel CDK4 and CDK6 inhibitor with homology to p16ink4. Mol Cell Biol. 1995 May; 15(5):2682-8.
  View in: PubMed
 
48. Itano A, Cado D, Chan FK, Robey E. A role for the cytoplasmic tail of the beta chain of CD8 in thymic selection. Immunity. 1994 Jul; 1(4):287-90.
  View in: PubMed
 
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Keyword
Last Name
Institution
    
 
 
 
Keywords   
Receptors, Tumor Necrosis Factor
Necrosis
Apoptosis
Antigens, CD
Signal Transduction
See all (220) keywords
Co-Authors  
Baehrecke, Eric
Brehm, Michael
Golenbock, Douglas
Kelliher, Michelle
See all (4) people
Physical Neighbors  
Rock, Kenneth
Snyder, L
Stern, Lawrence
Selin, Liisa
Strutt, Tara

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