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Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum.
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author list: Van Tyne D, Park DJ, Schaffner SF, Neafsey DE, Angelino E, Cortese JF, Barnes KG, Rosen DM, Lukens AK, Daniels RF, Milner DA, Johnson CA, Shlyakhter I, Grossman SR, Becker JS, Yamins D, Karlsson EK, Ndiaye D, Sarr O, Mboup S, Happi C, Furlotte NA, Eskin E, Kang HM, Hartl DL, Birren BW, Wiegand RC, Lander ES, Wirth DF, Volkman SK, Sabeti PC
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Rotation Projects: <p >Potential rotation projects My lab primarily investigates Plasmodium falciparum malaria-induced dysregulation of EBV-specific T cell immunity and its role in the etiology of endemic Burkitt lymphoma (eBL), the most prevalent pediatric cancer in Equatorial Africa. Within the context of our ongoing studies of healthy Kenyan children with divergent malaria exposure histories (chronic/repeated infections in a holoendemic area versus low infection rates in a nearby highland, malaria hypoendemic area) and by examining children diagnosed with eBL we have established a repository of samples that can be used to address this question. <p >1. One avenue of exploration involves homeostatic cytokine regulation of memory T cells. IL-15 and/or IL-7 responsiveness of EBV-specific memory T cells may be impaired in children with chronic malaria exposure and in children with endemic Burkitt lymphoma (eBL). We would like to investigate IL-15Ra and IL-7Ra surface expression, and CFSE proliferation of EBV-specific T cells in response to cognate antigen with and without IL-15 or IL-7 stimulation and compared children with divergent malaria exposure histories and children diagnosed with eBL. T cell responsiveness to IL-15 and IL-7 can be measured by STAT5 phosphorylation and the specificity of this effect for EBV-specific T cells can be evaluated by comparing IL-15Ra and IL-7Ra expression and responsiveness on other lymphocyte subsets and CMV-specific T cells. <p >2. Another putative mechanism by which malaria may interfere with the development of immunologic memory and influence EBV-specific T cell immunity is through the Programmed death-1 (PD-1) pathway. PD-1 is an immune inhibitory molecule that negatively regulates activated immune cells upon interacting with its ligands, programmed death ligand-1 (PD-L1) and programmed death ligand-2 (PD-L2) resulting in down-regulation of immune responses. Previous studies in murine and primate viral and parasitic diseases have reported the up-r…
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Combining Citizen Science and Genomics to Investigate Tick, Pathogen, and Commensal Microbiome at Single-Tick Resolution.
PubMed Identifier: 32038704
author list: Chauhan G, McClure J, Hekman J, Marsh PW, Bailey JA, Daniels RF, Genereux DP, Karlsson EK
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Challenges in identifying mRNA transcript starts and ends from long-read sequencing data.
PubMed Identifier: 37546743
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Challenges in identifying mRNA transcript starts and ends from long-read sequencing data.
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High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.
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linked information resource: RDTs as a source of DNA to study Plasmodium falciparum drug resistance in isolates from Senegal and the Comoros Islands.

Authorship 135522
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linked information resource: Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing.

Authorship 135580
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linked information resource: Temporal changes in Plasmodium falciparum reticulocyte binding protein homolog 2b (PfRh2b) in Senegal and The Gambia.

Authorship 135649
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linked information resource: Adherence to Mass Drug Administration with Dihydroartemisinin-Piperaquine and Plasmodium falciparum Clearance in Southern Province, Zambia.

Authorship 135686
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linked information resource: Case report of Plasmodium ovale curtisi malaria in Sri Lanka: relevance for the maintenance of elimination status.

Authorship 135797
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linked information resource: Surveillance of molecular markers for antimalarial resistance in Zambia: Polymorphism of Pfkelch 13, Pfmdr1 and Pfdhfr/Pfdhps genes.

Authorship 135820
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linked information resource: Use of a Plasmodium vivax genetic barcode for genomic surveillance and parasite tracking in Sri Lanka.

Authorship 135865
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linked information resource: Transmission of molecularly undetectable circulating parasite clones leads to high infection complexity in mosquitoes post feeding.

Authorship 135916
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linked information resource: Characterization of Plasmodium falciparum structure in Nigeria with malaria SNPs barcode.

Authorship 136044
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linked information resource: Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence.

Authorship 136127
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linked information resource: Clonal outbreak of Plasmodium falciparum infection in eastern Panama.

Authorship 136128
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linked information resource: Immune characterization of Plasmodium falciparum parasites with a shared genetic signature in a region of decreasing transmission.

Authorship 136211
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linked information resource: A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking.

Authorship 136216
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linked information resource: Application of genomics to field investigations of malaria by the international centers of excellence for malaria research.

Authorship 136244
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linked information resource: Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal.

Authorship 136247
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linked information resource: Genetic evidence for imported malaria and local transmission in Richard Toll, Senegal.

Authorship 136345
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linked information resource: Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thi?s, Senegal.

Authorship 136528
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linked information resource: COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data.

Authorship 136541
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linked information resource: Development of a single nucleotide polymorphism barcode to genotype Plasmodium vivax infections.

Authorship 136544
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linked information resource: Altered drug susceptibility during host adaptation of a Plasmodium falciparum strain in a non-human primate model.

Authorship 136560
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linked information resource: Modeling malaria genomics reveals transmission decline and rebound in Senegal.

Authorship 136620
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linked information resource: Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda.

Authorship 136627
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linked information resource: Evidence of non-Plasmodium falciparum malaria infection in K?dougou, S?n?gal.

Authorship 136651
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linked author: Daniels, Rachel
linked information resource: Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing.

Authorship 136675
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linked author: Daniels, Rachel
linked information resource: West Africa International Centers of Excellence for Malaria Research: Drug Resistance Patterns to Artemether-Lumefantrine in Senegal, Mali, and The Gambia.

Authorship 136895
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linked information resource: Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance.

Authorship 137035
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linked information resource: High resolution melting: a useful field-deployable method to measure dhfr and dhps drug resistance in both highly and lowly endemic Plasmodium populations.

Authorship 137043
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linked information resource: Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia.

Authorship 137191
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linked information resource: Genetic surveillance for monitoring the impact of drug use on Plasmodium falciparum populations.

Authorship 137578
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linked information resource: Evidence for Reduced Malaria Parasite Population after Application of Population-Level Antimalarial Drug Strategies in Southern Province, Zambia.

Authorship 137589
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linked author: Daniels, Rachel
linked information resource: Data on selected antimalarial drug resistance markers in Zambia.

Authorship 137623
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linked information resource: Genetic analysis reveals unique characteristics of Plasmodium falciparum parasite populations in Haiti.

Authorship 137661
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linked information resource: RH: a genetic metric for measuring intrahost Plasmodium falciparum relatedness and distinguishing cotransmission from superinfection.

Authorship 137739
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linked information resource: High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.

Authorship 138234
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linked information resource: Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal.

Authorship 138306
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linked author: Daniels, Rachel
linked information resource: Distribution pattern of Plasmodium falciparum chloroquine transporter (pfcrt) gene haplotypes in Sri Lanka 1996-2006.

Authorship 138722
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linked information resource: Relevance of Higher-Order Epistasis in Drug Resistance.

Authorship 138753
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linked information resource: Changes in drug sensitivity and anti-malarial drug resistance mutations over time among Plasmodium falciparum parasites in Senegal.

Authorship 138755
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linked information resource: Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal.

Authorship 139064
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linked information resource: Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria.

Changes in drug sensitivity and anti-malarial drug resistance mutations over time among Plasmodium falciparum parasites in Senegal.
PubMed Identifier: 24314037
author list: Van Tyne D, Dieye B, Valim C, Daniels RF, S?ne PD, Lukens AK, Ndiaye M, Bei AK, Ndiaye YD, Hamilton EJ, Ndir O, Mboup S, Volkman SK, Wirth DF, Ndiaye D
published in: Malaria journal
information resource reference: Van Tyne D, Dieye B, Valim C, Daniels RF, S?ne PD, Lukens AK, Ndiaye M, Bei AK, Ndiaye YD, Hamilton EJ, Ndir O, Mboup S, Volkman SK, Wirth DF, Ndiaye D. Changes in drug sensitivity and anti-malarial drug resistance mutations over time among Plasmodium falciparum parasites in Senegal. Malar J. 2013 Dec 06; 12:441.
journal title abbreviation: Malar J
publication date: 2013-12-06T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal.
PubMed Identifier: 29029619
author list: Seck MC, Thwing J, Fall FB, Gomis JF, Deme A, Ndiaye YD, Daniels R, Volkman SK, Ndiop M, Ba M, Ndiaye D
published in: Malaria journal
information resource reference: Seck MC, Thwing J, Fall FB, Gomis JF, Deme A, Ndiaye YD, Daniels R, Volkman SK, Ndiop M, Ba M, Ndiaye D. Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal. Malar J. 2017 10 13; 16(1):413.
journal title abbreviation: Malar J
publication date: 2017-10-13T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Evidence of non-Plasmodium falciparum malaria infection in K?dougou, S?n?gal.
PubMed Identifier: 28049489
author list: Daniels RF, Deme AB, Gomis JF, Dieye B, Durfee K, Thwing JI, Fall FB, Ba M, Ndiop M, Badiane AS, Ndiaye YD, Wirth DF, Volkman SK, Ndiaye D
published in: Malaria journal
information resource reference: Daniels RF, Deme AB, Gomis JF, Dieye B, Durfee K, Thwing JI, Fall FB, Ba M, Ndiop M, Badiane AS, Ndiaye YD, Wirth DF, Volkman SK, Ndiaye D. Evidence of non-Plasmodium falciparum malaria infection in K?dougou, S?n?gal. Malar J. 2017 01 03; 16(1):9.
journal title abbreviation: Malar J
publication date: 2017-01-03T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing.
PubMed Identifier: 28069653
author list: Talundzic E, Ndiaye YD, Deme AB, Olsen C, Patel DS, Biliya S, Daniels R, Vannberg FO, Volkman SK, Udhayakumar V, Ndiaye D
published in: Antimicrobial agents and chemotherapy
information resource reference: Talundzic E, Ndiaye YD, Deme AB, Olsen C, Patel DS, Biliya S, Daniels R, Vannberg FO, Volkman SK, Udhayakumar V, Ndiaye D. Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing. Antimicrob Agents Chemother. 2017 03; 61(3).
journal title abbreviation: Antimicrob Agents Chemother
publication date: 2017-02-23T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance.
PubMed Identifier: 29325146
author list: Bei AK, Niang M, Deme AB, Daniels RF, Sarr FD, Sokhna C, Talla C, Faye J, Diagne N, Doucoure S, Mboup S, Wirth DF, Tall A, Ndiaye D, Hartl DL, Volkman SK, Toure-Balde A
published in: The Journal of infectious diseases
information resource reference: Bei AK, Niang M, Deme AB, Daniels RF, Sarr FD, Sokhna C, Talla C, Faye J, Diagne N, Doucoure S, Mboup S, Wirth DF, Tall A, Ndiaye D, Hartl DL, Volkman SK, Toure-Balde A. Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance. J Infect Dis. 2018 01 30; 217(4):622-627.
journal title abbreviation: J Infect Dis
publication date: 2018-01-30T00:00:00
year: 2018
type: Academic Article
type: Article
type: Document
type: Information Resource

Modeling malaria genomics reveals transmission decline and rebound in Senegal.
PubMed Identifier: 25941365
author list: Daniels RF, Schaffner SF, Wenger EA, Proctor JL, Chang HH, Wong W, Baro N, Ndiaye D, Fall FB, Ndiop M, Ba M, Milner DA, Taylor TE, Neafsey DE, Volkman SK, Eckhoff PA, Hartl DL, Wirth DF
published in: Proceedings of the National Academy of Sciences of the United States of America
information resource reference: Daniels RF, Schaffner SF, Wenger EA, Proctor JL, Chang HH, Wong W, Baro N, Ndiaye D, Fall FB, Ndiop M, Ba M, Milner DA, Taylor TE, Neafsey DE, Volkman SK, Eckhoff PA, Hartl DL, Wirth DF. Modeling malaria genomics reveals transmission decline and rebound in Senegal. Proc Natl Acad Sci U S A. 2015 Jun 02; 112(22):7067-72.
journal title abbreviation: Proc Natl Acad Sci U S A
publication date: 2015-05-04T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking.
PubMed Identifier: 18959790
author list: Daniels R, Volkman SK, Milner DA, Mahesh N, Neafsey DE, Park DJ, Rosen D, Angelino E, Sabeti PC, Wirth DF, Wiegand RC
published in: Malaria journal
information resource reference: Daniels R, Volkman SK, Milner DA, Mahesh N, Neafsey DE, Park DJ, Rosen D, Angelino E, Sabeti PC, Wirth DF, Wiegand RC. A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking. Malar J. 2008 Oct 29; 7:223.
journal title abbreviation: Malar J
publication date: 2008-10-29T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

Application of genomics to field investigations of malaria by the international centers of excellence for malaria research.
PubMed Identifier: 22182668
author list: Volkman SK, Ndiaye D, Diakite M, Koita OA, Nwakanma D, Daniels RF, Park DJ, Neafsey DE, Muskavitch MA, Krogstad DJ, Sabeti PC, Hartl DL, Wirth DF
published in: Acta tropica
information resource reference: Volkman SK, Ndiaye D, Diakite M, Koita OA, Nwakanma D, Daniels RF, Park DJ, Neafsey DE, Muskavitch MA, Krogstad DJ, Sabeti PC, Hartl DL, Wirth DF. Application of genomics to field investigations of malaria by the international centers of excellence for malaria research. Acta Trop. 2012 Mar; 121(3):324-32.
journal title abbreviation: Acta Trop
publication date: 2011-12-13T00:00:00
year: 2011
type: Academic Article
type: Article
type: Document
type: Information Resource

Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence.
PubMed Identifier: 19077304
author list: Neafsey DE, Schaffner SF, Volkman SK, Park D, Montgomery P, Milner DA, Lukens A, Rosen D, Daniels R, Houde N, Cortese JF, Tyndall E, Gates C, Stange-Thomann N, Sarr O, Ndiaye D, Ndir O, Mboup S, Ferreira MU, Moraes Sdo L, Dash AP, Chitnis CE, Wiegand RC, Hartl DL, Birren BW, Lander ES, Sabeti PC, Wirth DF
published in: Genome biology
information resource reference: Neafsey DE, Schaffner SF, Volkman SK, Park D, Montgomery P, Milner DA, Lukens A, Rosen D, Daniels R, Houde N, Cortese JF, Tyndall E, Gates C, Stange-Thomann N, Sarr O, Ndiaye D, Ndir O, Mboup S, Ferreira MU, Moraes Sdo L, Dash AP, Chitnis CE, Wiegand RC, Hartl DL, Birren BW, Lander ES, Sabeti PC, Wirth DF. Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence. Genome Biol. 2008; 9(12):R171.
journal title abbreviation: Genome Biol
publication date: 2008-12-15T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.
PubMed Identifier: 40530694
author list: Peterman EL, Ploessl DS, Love KS, Sanabria V, Daniels RF, Johnstone CP, Godavarti DR, Kabaria SR, Oakes CG, Pai AA, Galloway KE
published in: Nucleic acids research
information resource reference: Peterman EL, Ploessl DS, Love KS, Sanabria V, Daniels RF, Johnstone CP, Godavarti DR, Kabaria SR, Oakes CG, Pai AA, Galloway KE. High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes. Nucleic Acids Res. 2025 Jun 06; 53(11).
journal title abbreviation: Nucleic Acids Res
publication date: 2025-06-06T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

Temporal changes in Plasmodium falciparum reticulocyte binding protein homolog 2b (PfRh2b) in Senegal and The Gambia.
PubMed Identifier: 31311552
author list: Di?dhiou CK, Moussa RA, Bei AK, Daniels R, Papa Mze N, Ndiaye D, Faye N, Wirth D, Amambua-Ngwa A, Mboup S, Ahouidi AD
published in: Malaria journal
information resource reference: Di?dhiou CK, Moussa RA, Bei AK, Daniels R, Papa Mze N, Ndiaye D, Faye N, Wirth D, Amambua-Ngwa A, Mboup S, Ahouidi AD. Temporal changes in Plasmodium falciparum reticulocyte binding protein homolog 2b (PfRh2b) in Senegal and The Gambia. Malar J. 2019 Jul 16; 18(1):239.
journal title abbreviation: Malar J
publication date: 2019-07-16T00:00:00
year: 2019
type: Academic Article
type: Article
type: Document
type: Information Resource

Relevance of Higher-Order Epistasis in Drug Resistance.
PubMed Identifier: 32745183
author list: Lozovsky ER, Daniels RF, Heffernan GD, Jacobus DP, Hartl DL
published in: Molecular biology and evolution
information resource reference: Lozovsky ER, Daniels RF, Heffernan GD, Jacobus DP, Hartl DL. Relevance of Higher-Order Epistasis in Drug Resistance. Mol Biol Evol. 2021 01 04; 38(1):142-151.
journal title abbreviation: Mol Biol Evol
publication date: 2021-01-04T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic evidence for imported malaria and local transmission in Richard Toll, Senegal.
PubMed Identifier: 32746830
author list: Daniels RF, Schaffner SF, Dieye Y, Dieng G, Hainsworth M, Fall FB, Diouf CN, Ndiop M, Cisse M, Gueye AB, Sarr O, Guinot P, Deme AB, Bei AK, Sy M, Thwing J, MacInnis B, Earle D, Guinovart C, Sene D, Hartl DL, Ndiaye D, Steketee RW, Wirth DF, Volkman SK
published in: Malaria journal
information resource reference: Daniels RF, Schaffner SF, Dieye Y, Dieng G, Hainsworth M, Fall FB, Diouf CN, Ndiop M, Cisse M, Gueye AB, Sarr O, Guinot P, Deme AB, Bei AK, Sy M, Thwing J, MacInnis B, Earle D, Guinovart C, Sene D, Hartl DL, Ndiaye D, Steketee RW, Wirth DF, Volkman SK. Genetic evidence for imported malaria and local transmission in Richard Toll, Senegal. Malar J. 2020 Aug 03; 19(1):276.
journal title abbreviation: Malar J
publication date: 2020-08-03T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Development of a single nucleotide polymorphism barcode to genotype Plasmodium vivax infections.
PubMed Identifier: 25781890
author list: Baniecki ML, Faust AL, Schaffner SF, Park DJ, Galinsky K, Daniels RF, Hamilton E, Ferreira MU, Karunaweera ND, Serre D, Zimmerman PA, S? JM, Wellems TE, Musset L, Legrand E, Melnikov A, Neafsey DE, Volkman SK, Wirth DF, Sabeti PC
published in: PLoS neglected tropical diseases
information resource reference: Baniecki ML, Faust AL, Schaffner SF, Park DJ, Galinsky K, Daniels RF, Hamilton E, Ferreira MU, Karunaweera ND, Serre D, Zimmerman PA, S? JM, Wellems TE, Musset L, Legrand E, Melnikov A, Neafsey DE, Volkman SK, Wirth DF, Sabeti PC. Development of a single nucleotide polymorphism barcode to genotype Plasmodium vivax infections. PLoS Negl Trop Dis. 2015 Mar; 9(3):e0003539.
journal title abbreviation: PLoS Negl Trop Dis
publication date: 2015-03-17T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic surveillance for monitoring the impact of drug use on Plasmodium falciparum populations.
PubMed Identifier: 34333350
author list: Ndiaye YD, Hartl DL, McGregor D, Badiane A, Fall FB, Daniels RF, Wirth DF, Ndiaye D, Volkman SK
published in: International journal for parasitology. Drugs and drug resistance
information resource reference: Ndiaye YD, Hartl DL, McGregor D, Badiane A, Fall FB, Daniels RF, Wirth DF, Ndiaye D, Volkman SK. Genetic surveillance for monitoring the impact of drug use on Plasmodium falciparum populations. Int J Parasitol Drugs Drug Resist. 2021 12; 17:12-22.
journal title abbreviation: Int J Parasitol Drugs Drug Resist
publication date: 2021-07-26T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Surveillance of molecular markers for antimalarial resistance in Zambia: Polymorphism of Pfkelch 13, Pfmdr1 and Pfdhfr/Pfdhps genes.
PubMed Identifier: 33002448
author list: Sitali L, Mwenda MC, Miller JM, Bridges DJ, Hawela MB, Hamainza B, Mudenda-Chilufya M, Chizema-Kawesha E, Daniels RF, Eisele TP, Nerland AH, Chipeta J, Lindtjorn B
published in: Acta tropica
information resource reference: Sitali L, Mwenda MC, Miller JM, Bridges DJ, Hawela MB, Hamainza B, Mudenda-Chilufya M, Chizema-Kawesha E, Daniels RF, Eisele TP, Nerland AH, Chipeta J, Lindtjorn B. Surveillance of molecular markers for antimalarial resistance in Zambia: Polymorphism of Pfkelch 13, Pfmdr1 and Pfdhfr/Pfdhps genes. Acta Trop. 2020 Dec; 212:105704.
journal title abbreviation: Acta Trop
publication date: 2020-09-29T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Immune characterization of Plasmodium falciparum parasites with a shared genetic signature in a region of decreasing transmission.
PubMed Identifier: 25368109
author list: Bei AK, Diouf A, Miura K, Larremore DB, Ribacke U, Tullo G, Moss EL, Neafsey DE, Daniels RF, Zeituni AE, Nosamiefan I, Volkman SK, Ahouidi AD, Ndiaye D, Dieye T, Mboup S, Buckee CO, Long CA, Wirth DF
published in: Infection and immunity
information resource reference: Bei AK, Diouf A, Miura K, Larremore DB, Ribacke U, Tullo G, Moss EL, Neafsey DE, Daniels RF, Zeituni AE, Nosamiefan I, Volkman SK, Ahouidi AD, Ndiaye D, Dieye T, Mboup S, Buckee CO, Long CA, Wirth DF. Immune characterization of Plasmodium falciparum parasites with a shared genetic signature in a region of decreasing transmission. Infect Immun. 2015 Jan; 83(1):276-85.
journal title abbreviation: Infect Immun
publication date: 2014-11-03T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic analysis reveals unique characteristics of Plasmodium falciparum parasite populations in Haiti.
PubMed Identifier: 33097045
author list: Daniels RF, Chenet S, Rogier E, Lucchi N, Herman C, Pierre B, Lemoine JF, Boncy J, Wirth DF, Chang MA, Udhayakumar V, Volkman SK
published in: Malaria journal
information resource reference: Daniels RF, Chenet S, Rogier E, Lucchi N, Herman C, Pierre B, Lemoine JF, Boncy J, Wirth DF, Chang MA, Udhayakumar V, Volkman SK. Genetic analysis reveals unique characteristics of Plasmodium falciparum parasite populations in Haiti. Malar J. 2020 Oct 23; 19(1):379.
journal title abbreviation: Malar J
publication date: 2020-10-23T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

RH: a genetic metric for measuring intrahost Plasmodium falciparum relatedness and distinguishing cotransmission from superinfection.
PubMed Identifier: 36246152
author list: Wong W, Volkman S, Daniels R, Schaffner S, Sy M, Ndiaye YD, Badiane AS, Deme AB, Diallo MA, Gomis J, Sy N, Ndiaye D, Wirth DF, Hartl DL
published in: PNAS nexus
information resource reference: Wong W, Volkman S, Daniels R, Schaffner S, Sy M, Ndiaye YD, Badiane AS, Deme AB, Diallo MA, Gomis J, Sy N, Ndiaye D, Wirth DF, Hartl DL. RH: a genetic metric for measuring intrahost Plasmodium falciparum relatedness and distinguishing cotransmission from superinfection. PNAS Nexus. 2022 Sep; 1(4):pgac187.
journal title abbreviation: PNAS Nexus
publication date: 2022-09-10T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria.
PubMed Identifier: 26575471
author list: Daniels R, Hamilton EJ, Durfee K, Ndiaye D, Wirth DF, Hartl DL, Volkman SK
published in: Journal of visualized experiments : JoVE
information resource reference: Daniels R, Hamilton EJ, Durfee K, Ndiaye D, Wirth DF, Hartl DL, Volkman SK. Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria. J Vis Exp. 2015 Nov 10; (105):e52839.
journal title abbreviation: J Vis Exp
publication date: 2015-11-10T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Characterization of Plasmodium falciparum structure in Nigeria with malaria SNPs barcode.
PubMed Identifier: 30558627
author list: Bankole BE, Kayode AT, Nosamiefan IO, Eromon P, Baniecki ML, Daniels RF, Hamilton EJ, Durfee K, MacInnis B, Okafor H, Sowunmi A, Volkman SK, Sabeti P, Wirth D, Happi CT, Folarin OA
published in: Malaria journal
information resource reference: Bankole BE, Kayode AT, Nosamiefan IO, Eromon P, Baniecki ML, Daniels RF, Hamilton EJ, Durfee K, MacInnis B, Okafor H, Sowunmi A, Volkman SK, Sabeti P, Wirth D, Happi CT, Folarin OA. Characterization of Plasmodium falciparum structure in Nigeria with malaria SNPs barcode. Malar J. 2018 Dec 17; 17(1):472.
journal title abbreviation: Malar J
publication date: 2018-12-17T00:00:00
year: 2018
type: Academic Article
type: Article
type: Document
type: Information Resource

Data on selected antimalarial drug resistance markers in Zambia.
PubMed Identifier: 33364273
author list: Sitali L, Mwenda MC, Miller JM, Bridges DJ, Hawela MB, Hamainza B, Mudenda-Chilufya M, Chizema-Kawesha E, Daniels R, Eisele TP, Nerland AH, Chipeta J, Lindtjorn B
published in: Data in brief
information resource reference: Sitali L, Mwenda MC, Miller JM, Bridges DJ, Hawela MB, Hamainza B, Mudenda-Chilufya M, Chizema-Kawesha E, Daniels R, Eisele TP, Nerland AH, Chipeta J, Lindtjorn B. Data on selected antimalarial drug resistance markers in Zambia. Data Brief. 2021 Feb; 34:106650.
journal title abbreviation: Data Brief
publication date: 2020-12-13T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thi?s, Senegal.
PubMed Identifier: 28118860
author list: Wong W, Griggs AD, Daniels RF, Schaffner SF, Ndiaye D, Bei AK, Deme AB, MacInnis B, Volkman SK, Hartl DL, Neafsey DE, Wirth DF
published in: Genome medicine
information resource reference: Wong W, Griggs AD, Daniels RF, Schaffner SF, Ndiaye D, Bei AK, Deme AB, MacInnis B, Volkman SK, Hartl DL, Neafsey DE, Wirth DF. Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thi?s, Senegal. Genome Med. 2017 01 24; 9(1):5.
journal title abbreviation: Genome Med
publication date: 2017-01-24T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Distribution pattern of Plasmodium falciparum chloroquine transporter (pfcrt) gene haplotypes in Sri Lanka 1996-2006.
PubMed Identifier: 22049031
author list: Zhang JJ, Senaratne TN, Daniels R, Valim C, Alifrangis M, Amerasinghe P, Konradsen F, Rajakaruna R, Wirth DF, Karunaweera ND
published in: The American journal of tropical medicine and hygiene
information resource reference: Zhang JJ, Senaratne TN, Daniels R, Valim C, Alifrangis M, Amerasinghe P, Konradsen F, Rajakaruna R, Wirth DF, Karunaweera ND. Distribution pattern of Plasmodium falciparum chloroquine transporter (pfcrt) gene haplotypes in Sri Lanka 1996-2006. Am J Trop Med Hyg. 2011 Nov; 85(5):811-4.
journal title abbreviation: Am J Trop Med Hyg
publication date: 2011-11-01T00:00:00
year: 2011
type: Academic Article
type: Article
type: Document
type: Information Resource

Clonal outbreak of Plasmodium falciparum infection in eastern Panama.
PubMed Identifier: 25336725
author list: Obaldia N, Baro NK, Calzada JE, Santamaria AM, Daniels R, Wong W, Chang HH, Hamilton EJ, Arevalo-Herrera M, Herrera S, Wirth DF, Hartl DL, Marti M, Volkman SK
published in: The Journal of infectious diseases
information resource reference: Obaldia N, Baro NK, Calzada JE, Santamaria AM, Daniels R, Wong W, Chang HH, Hamilton EJ, Arevalo-Herrera M, Herrera S, Wirth DF, Hartl DL, Marti M, Volkman SK. Clonal outbreak of Plasmodium falciparum infection in eastern Panama. J Infect Dis. 2015 Apr 01; 211(7):1087-96.
journal title abbreviation: J Infect Dis
publication date: 2014-10-21T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Altered drug susceptibility during host adaptation of a Plasmodium falciparum strain in a non-human primate model.
PubMed Identifier: 26880111
author list: Obald?a N, Dow GS, Gerena L, Kyle D, Otero W, Mantel PY, Baro N, Daniels R, Mukherjee A, Childs LM, Buckee C, Duraisingh MT, Volkman SK, Wirth DF, Marti M
published in: Scientific reports
information resource reference: Obald?a N, Dow GS, Gerena L, Kyle D, Otero W, Mantel PY, Baro N, Daniels R, Mukherjee A, Childs LM, Buckee C, Duraisingh MT, Volkman SK, Wirth DF, Marti M. Altered drug susceptibility during host adaptation of a Plasmodium falciparum strain in a non-human primate model. Sci Rep. 2016 Feb 16; 6:21216.
journal title abbreviation: Sci Rep
publication date: 2016-02-16T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal.
PubMed Identifier: 24533303
author list: Ndiaye D, Dieye B, Ndiaye YD, Van Tyne D, Daniels R, Bei AK, Mbaye A, Valim C, Lukens A, Mboup S, Ndir O, Wirth DF, Volkman S
published in: International journal for parasitology. Drugs and drug resistance
information resource reference: Ndiaye D, Dieye B, Ndiaye YD, Van Tyne D, Daniels R, Bei AK, Mbaye A, Valim C, Lukens A, Mboup S, Ndir O, Wirth DF, Volkman S. Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal. Int J Parasitol Drugs Drug Resist. 2013 Dec; 3:135-42.
journal title abbreviation: Int J Parasitol Drugs Drug Resist
publication date: 2013-08-12T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal.
PubMed Identifier: 23593309
author list: Daniels R, Chang HH, S?ne PD, Park DC, Neafsey DE, Schaffner SF, Hamilton EJ, Lukens AK, Van Tyne D, Mboup S, Sabeti PC, Ndiaye D, Wirth DF, Hartl DL, Volkman SK
published in: PloS one
information resource reference: Daniels R, Chang HH, S?ne PD, Park DC, Neafsey DE, Schaffner SF, Hamilton EJ, Lukens AK, Van Tyne D, Mboup S, Sabeti PC, Ndiaye D, Wirth DF, Hartl DL, Volkman SK. Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal. PLoS One. 2013; 8(4):e60780.
journal title abbreviation: PLoS One
publication date: 2013-04-04T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data.
PubMed Identifier: 25599890
author list: Galinsky K, Valim C, Salmier A, de Thoisy B, Musset L, Legrand E, Faust A, Baniecki ML, Ndiaye D, Daniels RF, Hartl DL, Sabeti PC, Wirth DF, Volkman SK, Neafsey DE
published in: Malaria journal
information resource reference: Galinsky K, Valim C, Salmier A, de Thoisy B, Musset L, Legrand E, Faust A, Baniecki ML, Ndiaye D, Daniels RF, Hartl DL, Sabeti PC, Wirth DF, Volkman SK, Neafsey DE. COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data. Malar J. 2015 Jan 19; 14:4.
journal title abbreviation: Malar J
publication date: 2015-01-19T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Transmission of molecularly undetectable circulating parasite clones leads to high infection complexity in mosquitoes post feeding.
PubMed Identifier: 29738740
author list: Grignard L, Gon?alves BP, Early AM, Daniels RF, Tiono AB, Guelb?ogo WM, Ou?draogo A, van Veen EM, Lanke K, Diarra A, Nebie I, Sirima SB, Targett GA, Volkman SK, Neafsey DE, Wirth DF, Bousema T, Drakeley C
published in: International journal for parasitology
information resource reference: Grignard L, Gon?alves BP, Early AM, Daniels RF, Tiono AB, Guelb?ogo WM, Ou?draogo A, van Veen EM, Lanke K, Diarra A, Nebie I, Sirima SB, Targett GA, Volkman SK, Neafsey DE, Wirth DF, Bousema T, Drakeley C. Transmission of molecularly undetectable circulating parasite clones leads to high infection complexity in mosquitoes post feeding. Int J Parasitol. 2018 07; 48(8):671-677.
journal title abbreviation: Int J Parasitol
publication date: 2018-05-05T00:00:00
year: 2018
type: Academic Article
type: Article
type: Document
type: Information Resource

High resolution melting: a useful field-deployable method to measure dhfr and dhps drug resistance in both highly and lowly endemic Plasmodium populations.
PubMed Identifier: 28420422
author list: Ndiaye YD, Di?dhiou CK, Bei AK, Dieye B, Mbaye A, Mze NP, Daniels RF, Ndiaye IM, D?me AB, Gaye A, Sy M, Ndiaye T, Badiane AS, Ndiaye M, Premji Z, Wirth DF, Mboup S, Krogstad D, Volkman SK, Ahouidi AD, Ndiaye D
published in: Malaria journal
information resource reference: Ndiaye YD, Di?dhiou CK, Bei AK, Dieye B, Mbaye A, Mze NP, Daniels RF, Ndiaye IM, D?me AB, Gaye A, Sy M, Ndiaye T, Badiane AS, Ndiaye M, Premji Z, Wirth DF, Mboup S, Krogstad D, Volkman SK, Ahouidi AD, Ndiaye D. High resolution melting: a useful field-deployable method to measure dhfr and dhps drug resistance in both highly and lowly endemic Plasmodium populations. Malar J. 2017 Apr 19; 16(1):153.
journal title abbreviation: Malar J
publication date: 2017-04-19T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Case report of Plasmodium ovale curtisi malaria in Sri Lanka: relevance for the maintenance of elimination status.
PubMed Identifier: 28438137
author list: Gunawardena S, Daniels RF, Yahathugoda TC, Weerasooriya MV, Durfee K, Volkman SK, Wirth DF, Karunaweera ND
published in: BMC infectious diseases
information resource reference: Gunawardena S, Daniels RF, Yahathugoda TC, Weerasooriya MV, Durfee K, Volkman SK, Wirth DF, Karunaweera ND. Case report of Plasmodium ovale curtisi malaria in Sri Lanka: relevance for the maintenance of elimination status. BMC Infect Dis. 2017 04 24; 17(1):307.
journal title abbreviation: BMC Infect Dis
publication date: 2017-04-24T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia.
PubMed Identifier: 28494763
author list: Mukherjee A, Bopp S, Magistrado P, Wong W, Daniels R, Demas A, Schaffner S, Amaratunga C, Lim P, Dhorda M, Miotto O, Woodrow C, Ashley EA, Dondorp AM, White NJ, Wirth D, Fairhurst R, Volkman SK
published in: Malaria journal
information resource reference: Mukherjee A, Bopp S, Magistrado P, Wong W, Daniels R, Demas A, Schaffner S, Amaratunga C, Lim P, Dhorda M, Miotto O, Woodrow C, Ashley EA, Dondorp AM, White NJ, Wirth D, Fairhurst R, Volkman SK. Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia. Malar J. 2017 05 12; 16(1):195.
journal title abbreviation: Malar J
publication date: 2017-05-12T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda.
PubMed Identifier: 27197604
author list: Chang HH, Meibalan E, Zelin J, Daniels R, Eziefula AC, Meyer EC, Tadesse F, Grignard L, Joice RC, Drakeley C, Wirth DF, Volkman SK, Buckee C, Bousema T, Marti M
published in: Scientific reports
information resource reference: Chang HH, Meibalan E, Zelin J, Daniels R, Eziefula AC, Meyer EC, Tadesse F, Grignard L, Joice RC, Drakeley C, Wirth DF, Volkman SK, Buckee C, Bousema T, Marti M. Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda. Sci Rep. 2016 05 20; 6:26330.
journal title abbreviation: Sci Rep
publication date: 2016-05-20T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Evidence for Reduced Malaria Parasite Population after Application of Population-Level Antimalarial Drug Strategies in Southern Province, Zambia.
PubMed Identifier: 32618255
author list: Daniels RF, Schaffner SF, Bennett A, Porter TR, Yukich JO, Mulube C, Mambwe B, Mwenda MC, Chishimba S, Bridges DJ, Moonga H, Hamainza B, Chizema Kawesha E, Miller JM, Steketee RW, Wirth DF, Eisele TP, Hartl DL, Volkman SK
published in: The American journal of tropical medicine and hygiene
information resource reference: Daniels RF, Schaffner SF, Bennett A, Porter TR, Yukich JO, Mulube C, Mambwe B, Mwenda MC, Chishimba S, Bridges DJ, Moonga H, Hamainza B, Chizema Kawesha E, Miller JM, Steketee RW, Wirth DF, Eisele TP, Hartl DL, Volkman SK. Evidence for Reduced Malaria Parasite Population after Application of Population-Level Antimalarial Drug Strategies in Southern Province, Zambia. Am J Trop Med Hyg. 2020 08; 103(2_Suppl):66-73.
journal title abbreviation: Am J Trop Med Hyg
publication date: 2020-08-01T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Adherence to Mass Drug Administration with Dihydroartemisinin-Piperaquine and Plasmodium falciparum Clearance in Southern Province, Zambia.
PubMed Identifier: 32618267
author list: Finn TP, Porter TR, Moonga H, Silumbe K, Daniels RF, Volkman SK, Yukich JO, Keating J, Bennett A, Steketee RW, Miller JM, Eisele TP
published in: The American journal of tropical medicine and hygiene
information resource reference: Finn TP, Porter TR, Moonga H, Silumbe K, Daniels RF, Volkman SK, Yukich JO, Keating J, Bennett A, Steketee RW, Miller JM, Eisele TP. Adherence to Mass Drug Administration with Dihydroartemisinin-Piperaquine and Plasmodium falciparum Clearance in Southern Province, Zambia. Am J Trop Med Hyg. 2020 08; 103(2_Suppl):37-45.
journal title abbreviation: Am J Trop Med Hyg
publication date: 2020-08-01T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing.
PubMed Identifier: 31262308
author list: Early AM, Daniels RF, Farrell TM, Grimsby J, Volkman SK, Wirth DF, MacInnis BL, Neafsey DE
published in: Malaria journal
information resource reference: Early AM, Daniels RF, Farrell TM, Grimsby J, Volkman SK, Wirth DF, MacInnis BL, Neafsey DE. Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing. Malar J. 2019 Jul 01; 18(1):219.
journal title abbreviation: Malar J
publication date: 2019-07-01T00:00:00
year: 2019
type: Academic Article
type: Article
type: Document
type: Information Resource

West Africa International Centers of Excellence for Malaria Research: Drug Resistance Patterns to Artemether-Lumefantrine in Senegal, Mali, and The Gambia.
PubMed Identifier: 27549635
author list: Dieye B, Affara M, Sangare L, Joof F, Ndiaye YD, Gomis JF, Ndiaye M, Mbaye A, Diakite M, Sy N, Mbengue B, Deme AB, Daniels R, Ahouidi AD, Dieye T, Abdullahi A, Doumbia S, Ndiaye JL, Diarra A, Ismaela A, Coulibaly M, Welty C, Ngwa AA, Shaffer J, D'Alessandro U, Volkman SK, Wirth DF, Krogstad DJ, Koita O, Nwakanma D, Ndiaye D
published in: The American journal of tropical medicine and hygiene
information resource reference: Dieye B, Affara M, Sangare L, Joof F, Ndiaye YD, Gomis JF, Ndiaye M, Mbaye A, Diakite M, Sy N, Mbengue B, Deme AB, Daniels R, Ahouidi AD, Dieye T, Abdullahi A, Doumbia S, Ndiaye JL, Diarra A, Ismaela A, Coulibaly M, Welty C, Ngwa AA, Shaffer J, D'Alessandro U, Volkman SK, Wirth DF, Krogstad DJ, Koita O, Nwakanma D, Ndiaye D. West Africa International Centers of Excellence for Malaria Research: Drug Resistance Patterns to Artemether-Lumefantrine in Senegal, Mali, and The Gambia. Am J Trop Med Hyg. 2016 Nov 02; 95(5):1054-1060.
journal title abbreviation: Am J Trop Med Hyg
publication date: 2016-08-22T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Use of a Plasmodium vivax genetic barcode for genomic surveillance and parasite tracking in Sri Lanka.
PubMed Identifier: 32958025
author list: Dewasurendra RL, Baniecki ML, Schaffner S, Siriwardena Y, Moon J, Doshi R, Gunawardena S, Daniels RF, Neafsey D, Volkman S, Chandrasekharan NV, Wirth DF, Karunaweera ND
published in: Malaria journal
information resource reference: Dewasurendra RL, Baniecki ML, Schaffner S, Siriwardena Y, Moon J, Doshi R, Gunawardena S, Daniels RF, Neafsey D, Volkman S, Chandrasekharan NV, Wirth DF, Karunaweera ND. Use of a Plasmodium vivax genetic barcode for genomic surveillance and parasite tracking in Sri Lanka. Malar J. 2020 Sep 21; 19(1):342.
journal title abbreviation: Malar J
publication date: 2020-09-21T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

RDTs as a source of DNA to study Plasmodium falciparum drug resistance in isolates from Senegal and the Comoros Islands.
PubMed Identifier: 26415927
author list: Papa Mze N, Ndiaye YD, Diedhiou CK, Rahamatou S, Dieye B, Daniels RF, Hamilton EJ, Diallo M, Bei AK, Wirth DF, Mboup S, Volkman SK, Ahouidi AD, Ndiaye D
published in: Malaria journal
information resource reference: Papa Mze N, Ndiaye YD, Diedhiou CK, Rahamatou S, Dieye B, Daniels RF, Hamilton EJ, Diallo M, Bei AK, Wirth DF, Mboup S, Volkman SK, Ahouidi AD, Ndiaye D. RDTs as a source of DNA to study Plasmodium falciparum drug resistance in isolates from Senegal and the Comoros Islands. Malar J. 2015 Sep 29; 14:373.
journal title abbreviation: Malar J
publication date: 2015-09-29T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 139698
type: Authorship
author rank in publication: 6
linked author: Daniels, Rachel
linked information resource: Plasmodium falciparum genomic surveillance reveals spatial and temporal trends, association of genetic and physical distance, and household clustering.

Plasmodium falciparum genomic surveillance reveals spatial and temporal trends, association of genetic and physical distance, and household clustering.
PubMed Identifier: 35042879
author list: Sy M, Deme AB, Warren JL, Early A, Schaffner S, Daniels RF, Dieye B, Ndiaye IM, Diedhiou Y, Mbaye AM, Volkman SK, Hartl DL, Wirth DF, Ndiaye D, Bei AK
published in: Scientific reports
information resource reference: Sy M, Deme AB, Warren JL, Early A, Schaffner S, Daniels RF, Dieye B, Ndiaye IM, Diedhiou Y, Mbaye AM, Volkman SK, Hartl DL, Wirth DF, Ndiaye D, Bei AK. Plasmodium falciparum genomic surveillance reveals spatial and temporal trends, association of genetic and physical distance, and household clustering. Sci Rep. 2022 01 18; 12(1):938.
journal title abbreviation: Sci Rep
publication date: 2022-01-18T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Adjunct Associate Professor
is primary position: true
position in department: Medicine
position in division: Infectious Diseases
sort order: 1
type: Position
HR job title: Adjunct Associate Professor
position in organization: UMass Chan Medical School