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Atomic contact vectors in protein-protein recognition.
Optimizing protein representations with information theory.
A flexible docking approach for prediction of T cell receptor-peptide-MHC complexes.
Performance of ZDOCK in CAPRI rounds 20-26.
Protein-protein docking benchmark version 4.0.
Accelerating protein docking in ZDOCK using an advanced 3D convolution library.
Computational design of the affinity and specificity of a therapeutic T cell receptor.
Binding interface prediction by combining protein-protein docking results.
Identification and validation of a novel cell-recognition site (KNEED) on the 8th type III domain of fibronectin.
Protein structure alignment using a genetic algorithm.
VRDD: applying virtual reality visualization to protein docking and design.
Computational determination of the structure of rat Fc bound to the neonatal Fc receptor.
Effect of conformational flexibility and solvation on receptor-ligand binding free energies.
Prediction of protein complexes using empirical free energy functions.
Cytotoxic T cell recognition of allelic variants of HLA B35 bound to an Epstein-Barr virus epitope: influence of peptide conformation and TCR-peptide interaction.
Human transaldolase and cross-reactive viral epitopes identified by autoantibodies of multiple sclerosis patients.
ATLAS: A database linking binding affinities with structures for wild-type and mutant TCR-pMHC complexes.
Integrating Cross-Linking Experiments with Ab Initio Protein-Protein Docking.