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Kurt Yilmaz, Nese

One or more keywords matched the following items that are connected to Kurt Yilmaz, Nese

Item Type	Name
Academic Article	Cooperative fluctuations of unliganded and substrate-bound HIV-1 protease: a structure-based analysis on a variety of conformations from crystallography and molecular dynamics simulations.
Academic Article	Extreme entropy-enthalpy compensation in a drug-resistant variant of HIV-1 protease.
Academic Article	Cooperative effects of drug-resistance mutations in the flap region of HIV-1 protease.
Academic Article	Structure-based prediction of potential binding and nonbinding peptides to HIV-1 protease.
Academic Article	Structural and thermodynamic basis of amprenavir/darunavir and atazanavir resistance in HIV-1 protease with mutations at residue 50.
Concept	Models, Molecular
Academic Article	HIV-1 protease-substrate coevolution in nelfinavir resistance.
Academic Article	Drug resistance conferred by mutations outside the active site through alterations in the dynamic and structural ensemble of HIV-1 protease.
Academic Article	Nonnative helical motif in a chaperone-bound protein fragment.
Academic Article	Thermodynamic and kinetic characterization of apoHmpH, a fast-folding bacterial globin.
Academic Article	Binding specificity of an alpha-helical protein sequence to a full-length Hsp70 chaperone and its minimal substrate-binding domain.
Academic Article	Residue-specific contact order and contact breadth in single-domain proteins: implications for folding as a function of chain elongation.
Academic Article	Nonrandom distribution of intramolecular contacts in native single-domain proteins.
Academic Article	High-resolution conformation and backbone dynamics of a soluble aggregate of apomyoglobin119.
Academic Article	Sub-millisecond chain collapse of the Escherichia coli globin ApoHmpH.
Academic Article	Conformational dynamics of chymotrypsin inhibitor 2 by coarse-grained simulations.
Academic Article	Conformational dynamics of subtilisin-chymotrypsin inhibitor 2 complex by coarse-grained simulations.
Academic Article	Burial of nonpolar surface area and thermodynamic stabilization of globins as a function of chain elongation.
Academic Article	Electrostatic effect of the ribosomal surface on nascent polypeptide dynamics.
Academic Article	The ssDNA Mutator APOBEC3A Is Regulated by Cooperative Dimerization.
Academic Article	Structural and molecular analysis of a protective epitope of Lyme disease antigen OspA and antibody interactions.
Academic Article	Structural Determination of the Broadly Reactive Anti-IGHV1-69 Anti-idiotypic Antibody G6 and Its Idiotope.
Academic Article	Substrate sequence selectivity of APOBEC3A implicates intra-DNA interactions.
Academic Article	Crystal structure of APOBEC3A bound to single-stranded DNA reveals structural basis for cytidine deamination and specificity.
Academic Article	Molecular Mechanism of Resistance in a Clinically Significant Double-Mutant Variant of HCV NS3/4A Protease.
Academic Article	T cell epitope engineering: an avian H7N9 influenza vaccine strategy for pandemic preparedness and response.
Academic Article	HIV-1 Protease Uses Bi-Specific S2/S2' Subsites to Optimize Cleavage of Two Classes of Target Sites.
Academic Article	Molecular Determinants of Epistasis in HIV-1 Protease: Elucidating the Interdependence of L89V and L90M Mutations in Resistance.
Academic Article	Optimizing the refinement of merohedrally twinned P61 HIV-1 protease-inhibitor cocrystal structures.
Academic Article	Structural Analysis of Potent Hybrid HIV-1 Protease Inhibitors Containing Bis-tetrahydrofuran in a Pseudosymmetric Dipeptide Isostere.
Academic Article	A cross-reactive human IgA monoclonal antibody blocks SARS-CoV-2 spike-ACE2 interaction.
Academic Article	Crystal Structure of SARS-CoV-2 Main Protease in Complex with the Non-Covalent Inhibitor ML188.
Academic Article	Structural basis of substrate specificity in human cytidine deaminase family APOBEC3s.

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