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Margaret Riley PhD

TitleProfessor
InstitutionUniversity of Massachusetts Amherst
DepartmentCollege of Natural Sciences
Address306 Morrill Science Center III
Amherst, MA 01003
Phone413-545-2132
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    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Roy SM, Riley MA. Evaluation of the potential of colicins to prevent extraluminal contamination of urinary catheters by Escherichia coli. Int J Antimicrob Agents. 2019 Jul 05. PMID: 31284040.
      View in: PubMed
    2. Qiu XQ, Roy SM, Riley MA. Pheromonicins: an ecologically sound family of bacteriocin-based antibiotics for use in the age of the microbiome. Future Microbiol. 2015; 10(12):1969-79. PMID: 26610020.
      View in: PubMed
    3. Li X, Kong H, Mout R, Saha K, Moyano DF, Robinson SM, Rana S, Zhang X, Riley MA, Rotello VM. Rapid identification of bacterial biofilms and biofilm wound models using a multichannel nanosensor. ACS Nano. 2014 Dec 23; 8(12):12014-9. PMID: 25454256.
      View in: PubMed
    4. Li X, Robinson SM, Gupta A, Saha K, Jiang Z, Moyano DF, Sahar A, Riley MA, Rotello VM. Functional gold nanoparticles as potent antimicrobial agents against multi-drug-resistant bacteria. ACS Nano. 2014 Oct 28; 8(10):10682-6. PMID: 25232643.
      View in: PubMed
    5. Moulin L, Klonowska A, Caroline B, Booth K, Vriezen JA, Melkonian R, James EK, Young JP, Bena G, Hauser L, Land M, Kyrpides N, Bruce D, Chain P, Copeland A, Pitluck S, Woyke T, Lizotte-Waniewski M, Bristow J, Riley M. Complete Genome sequence of Burkholderia phymatum STM815(T), a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. Stand Genomic Sci. 2014 Jun 15; 9(3):763-74. PMID: 25197461.
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    6. Dorit RL, Roy CM, Robinson SM, Riley MA. The evolutionary histories of clinical and environmental SHV ß-lactamases are intertwined. J Mol Evol. 2013 Jun; 76(6):388-93. PMID: 23860538.
      View in: PubMed
    7. Riley MA, Robinson SM, Roy CM, Dorit RL. Rethinking the composition of a rational antibiotic arsenal for the 21st century. Future Med Chem. 2013 Jul; 5(11):1231-42. PMID: 23859205.
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    8. Riley MA, Robinson SM, Roy CM, Dennis M, Liu V, Dorit RL. Resistance is futile: the bacteriocin model for addressing the antibiotic resistance challenge. Biochem Soc Trans. 2012 Dec 1; 40(6):1438-42. PMID: 23176495.
      View in: PubMed
    9. Majeed H, Gillor O, Kerr B, Riley MA. Competitive interactions in Escherichia coli populations: the role of bacteriocins. ISME J. 2011 Jan; 5(1):71-81. PMID: 20664553.
      View in: PubMed
    10. Bakkal S, Robinson SM, Ordonez CL, Waltz DA, Riley MA. Role of bacteriocins in mediating interactions of bacterial isolates taken from cystic fibrosis patients. Microbiology. 2010 Jul; 156(Pt 7):2058-67. PMID: 20378653.
      View in: PubMed
    11. Vriezen JA, Valliere M, Riley MA. The evolution of reduced microbial killing. Genome Biol Evol. 2009 Oct 20; 1:400-8. PMID: 20333208.
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    12. Gillor O, Giladi I, Riley MA. Persistence of colicinogenic Escherichia coli in the mouse gastrointestinal tract. BMC Microbiol. 2009 Aug 12; 9:165. PMID: 19674447.
      View in: PubMed
    13. Riley MA, Lizotte-Waniewski M. Population genomics and the bacterial species concept. Methods Mol Biol. 2009; 532:367-77. PMID: 19271196.
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    14. Gillor O, Vriezen JA, Riley MA. The role of SOS boxes in enteric bacteriocin regulation. Microbiology. 2008 Jun; 154(Pt 6):1783-92. PMID: 18524933.
      View in: PubMed
    15. Bannigan A, Lizotte-Waniewski M, Riley M, Baskin TI. Emerging molecular mechanisms that power and regulate the anastral mitotic spindle of flowering plants. Cell Motil Cytoskeleton. 2008 Jan; 65(1):1-11. PMID: 17968986.
      View in: PubMed
    16. Chavan M, Rafi H, Wertz J, Goldstone C, Riley MA. Phage associated bacteriocins reveal a novel mechanism for bacteriocin diversification in Klebsiella. J Mol Evol. 2005 Apr; 60(4):546-56. PMID: 15883889.
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    17. Riley MA, Wertz JE, Goldstone C. The Ecology and Evolution of Microbial Defense Systems in Escherichia coli. EcoSal Plus. 2004 Dec; 1(1). PMID: 26443346.
      View in: PubMed
    18. Kirkup BC, Riley MA. Antibiotic-mediated antagonism leads to a bacterial game of rock-paper-scissors in vivo. Nature. 2004 Mar 25; 428(6981):412-4. PMID: 15042087.
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    19. Wertz JE, Riley MA. Chimeric nature of two plasmids of Hafnia alvei encoding the bacteriocins alveicins A and B. J Bacteriol. 2004 Mar; 186(6):1598-605. PMID: 14996789.
      View in: PubMed
    20. Gillor O, Kirkup BC, Riley MA. Colicins and microcins: the next generation antimicrobials. Adv Appl Microbiol. 2004; 54:129-46. PMID: 15251279.
      View in: PubMed
    21. Wertz JE, Goldstone C, Gordon DM, Riley MA. A molecular phylogeny of enteric bacteria and implications for a bacterial species concept. J Evol Biol. 2003 Nov; 16(6):1236-48. PMID: 14640415.
      View in: PubMed
    22. Riley MA, Goldstone CM, Wertz JE, Gordon D. A phylogenetic approach to assessing the targets of microbial warfare. J Evol Biol. 2003 Jul; 16(4):690-7. PMID: 14632232.
      View in: PubMed
    23. Lenski RE, Winkworth CL, Riley MA. Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations. J Mol Evol. 2003 Apr; 56(4):498-508. PMID: 12664169.
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    24. Dorit RL, Riley MA. When comparative information leads us astray: the receptor-binding region of colicin E9. J Mol Evol. 2002 Sep; 55(3):347-55. PMID: 12187387.
      View in: PubMed
    25. Kerr B, Riley MA, Feldman MW, Bohannan BJ. Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors. Nature. 2002 Jul 11; 418(6894):171-4. PMID: 12110887.
      View in: PubMed
    26. Riley MA, Wertz JE. Bacteriocin diversity: ecological and evolutionary perspectives. Biochimie. 2002 May-Jun; 84(5-6):357-64. PMID: 12423779.
      View in: PubMed
    27. Riley MA, Wertz JE. Bacteriocins: evolution, ecology, and application. Annu Rev Microbiol. 2002; 56:117-37. PMID: 12142491.
      View in: PubMed
    28. Riley MA, Pinou T, Wertz JE, Tan Y, Valletta CM. Molecular characterization of the klebicin B plasmid of Klebsiella pneumoniae. Plasmid. 2001 May; 45(3):209-21. PMID: 11407916.
      View in: PubMed
    29. Ng WV, Kennedy SP, Mahairas GG, Berquist B, Pan M, Shukla HD, Lasky SR, Baliga NS, Thorsson V, Sbrogna J, Swartzell S, Weir D, Hall J, Dahl TA, Welti R, Goo YA, Leithauser B, Keller K, Cruz R, Danson MJ, Hough DW, Maddocks DG, Jablonski PE, Krebs MP, Angevine CM, Dale H, Isenbarger TA, Peck RF, Pohlschroder M, Spudich JL, Jung KW, Alam M, Freitas T, Hou S, Daniels CJ, Dennis PP, Omer AD, Ebhardt H, Lowe TM, Liang P, Riley M, Hood L, DasSarma S. Genome sequence of Halobacterium species NRC-1. Proc Natl Acad Sci U S A. 2000 Oct 24; 97(22):12176-81. PMID: 11016950.
      View in: PubMed
    30. Riley MA, Cadavid L, Collett MS, Neely MN, Adams MD, Phillips CM, Neel JV, Friedman D. The newly characterized colicin Y provides evidence of positive selection in pore-former colicin diversification. Microbiology. 2000 Jul; 146 ( Pt 7):1671-7. PMID: 10878131.
      View in: PubMed
    31. Gordon DM, Riley MA. A theoretical and empirical investigation of the invasion dynamics of colicinogeny. Microbiology. 1999 Mar; 145 ( Pt 3):655-61. PMID: 10217499.
      View in: PubMed
    32. Riley MA, Gordon DM. The ecological role of bacteriocins in bacterial competition. Trends Microbiol. 1999 Mar; 7(3):129-33. PMID: 10203843.
      View in: PubMed
    33. Wernegreen JJ, Riley MA. Comparison of the evolutionary dynamics of symbiotic and housekeeping loci: a case for the genetic coherence of rhizobial lineages. Mol Biol Evol. 1999 Jan; 16(1):98-113. PMID: 10331255.
      View in: PubMed
    34. Gordon DM, Riley MA, Pinou T. Temporal changes in the frequency of colicinogeny in Escherichia coli from house mice. Microbiology. 1998 Aug; 144 ( Pt 8):2233-40. PMID: 9720045.
      View in: PubMed
    35. Tan Y, Riley MA. Positive selection and recombination: major molecular mechanisms in colicin diversification. Trends Ecol Evol. 1997 Aug; 12(9):348-51. PMID: 21238101.
      View in: PubMed
    36. Tan Y, Riley MA. Nucleotide polymorphism in colicin E2 gene clusters: evidence for nonneutral evolution. Mol Biol Evol. 1997 Jun; 14(6):666-73. PMID: 9190068.
      View in: PubMed
    37. Tan Y, Riley MA. Rapid invasion by colicinogenic Escherichia coli with novel immunity functions. Microbiology. 1996 Aug; 142 ( Pt 8):2175-80. PMID: 8760932.
      View in: PubMed
    38. Wagner RR, Riley MA. Low synonymous site variation at the lacY locus in Escherichia coli suggests the action of positive selection. J Mol Evol. 1996 Feb; 42(2):79-84. PMID: 8919858.
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    39. Feldgarden M, Golden S, Wilson H, Riley MA. Can phage defence maintain colicin plasmids in Escherichia coli? Microbiology. 1995 Nov; 141 ( Pt 11):2977-84. PMID: 8535525.
      View in: PubMed
    40. Sun L, Jiang RZ, Steinbach S, Holmes A, Campanelli C, Forstner J, Sajjan U, Tan Y, Riley M, Goldstein R. The emergence of a highly transmissible lineage of cbl+ Pseudomonas (Burkholderia) cepacia causing CF centre epidemics in North America and Britain. Nat Med. 1995 Jul; 1(7):661-6. PMID: 7585148.
      View in: PubMed
    41. Riley MA, Tan Y, Wang J. Nucleotide polymorphism in colicin E1 and Ia plasmids from natural isolates of Escherichia coli. Proc Natl Acad Sci U S A. 1994 Nov 8; 91(23):11276-80. PMID: 7972047.
      View in: PubMed
    42. Tan Y, Bishoff ST, Riley MA. Ubiquitins revisited: further examples of within- and between-locus concerted evolution. Mol Phylogenet Evol. 1993 Dec; 2(4):351-60. PMID: 8049784.
      View in: PubMed
    43. Riley MA. Positive selection for colicin diversity in bacteria. Mol Biol Evol. 1993 Sep; 10(5):1048-59. PMID: 8412648.
      View in: PubMed
    44. Riley MA, Gordon DM. A survey of Col plasmids in natural isolates of Escherichia coli and an investigation into the stability of Col-plasmid lineages. J Gen Microbiol. 1992 Jul; 138(7):1345-52. PMID: 1512564.
      View in: PubMed
    45. Gordon DM, Riley MA. A theoretical and experimental analysis of bacterial growth in the bladder. Mol Microbiol. 1992 Feb; 6(4):555-62. PMID: 1560784.
      View in: PubMed
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