Header Logo

Connection

Oliver Rando to Chromatin

This is a "connection" page, showing publications Oliver Rando has written about Chromatin.
Connection Strength

6.748
  1. Yin Q, Yang CH, Strelkova OS, Wu J, Sun Y, Gopalan S, Yang L, Dekker J, Fazzio TG, Li XZ, Gibcus J, Rando OJ. Revisiting chromatin packaging in mouse sperm. Genome Res. 2023 12 27; 33(12):2079-2093.
    View in: PubMed
    Score: 0.601
  2. Krietenstein N, Rando OJ. Mammalian Micro-C-XL. Methods Mol Biol. 2022; 2458:321-332.
    View in: PubMed
    Score: 0.524
  3. Krietenstein N, Rando OJ. Mesoscale organization of the chromatin fiber. Curr Opin Genet Dev. 2020 04; 61:32-36.
    View in: PubMed
    Score: 0.465
  4. Yildirim O, Hung JH, Cedeno RJ, Weng Z, Lengner CJ, Rando OJ. A system for genome-wide histone variant dynamics in ES cells reveals dynamic MacroH2A2 replacement at promoters. PLoS Genet. 2014 Aug; 10(8):e1004515.
    View in: PubMed
    Score: 0.313
  5. Carone BR, Hung JH, Hainer SJ, Chou MT, Carone DM, Weng Z, Fazzio TG, Rando OJ. High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm. Dev Cell. 2014 Jul 14; 30(1):11-22.
    View in: PubMed
    Score: 0.311
  6. Weiner A, Chen HV, Liu CL, Rahat A, Klien A, Soares L, Gudipati M, Pfeffner J, Regev A, Buratowski S, Pleiss JA, Friedman N, Rando OJ. Systematic dissection of roles for chromatin regulators in a yeast stress response. PLoS Biol. 2012; 10(7):e1001369.
    View in: PubMed
    Score: 0.273
  7. Rando OJ. Combinatorial complexity in chromatin structure and function: revisiting the histone code. Curr Opin Genet Dev. 2012 Apr; 22(2):148-55.
    View in: PubMed
    Score: 0.266
  8. Rando OJ, Winston F. Chromatin and transcription in yeast. Genetics. 2012 Feb; 190(2):351-87.
    View in: PubMed
    Score: 0.263
  9. Tsankov A, Yanagisawa Y, Rhind N, Regev A, Rando OJ. Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization. Genome Res. 2011 Nov; 21(11):1851-62.
    View in: PubMed
    Score: 0.256
  10. Kaufman PD, Rando OJ. Chromatin as a potential carrier of heritable information. Curr Opin Cell Biol. 2010 Jun; 22(3):284-90.
    View in: PubMed
    Score: 0.231
  11. Hughes A, Rando OJ. Chromatin 'programming' by sequence--is there more to the nucleosome code than %GC? J Biol. 2009; 8(11):96.
    View in: PubMed
    Score: 0.228
  12. Rando OJ, Chang HY. Genome-wide views of chromatin structure. Annu Rev Biochem. 2009; 78:245-71.
    View in: PubMed
    Score: 0.213
  13. Rando O. A biologist despairs over the difficulty of demonstrating heritability of chromatin states. Nature. 2008 Jul 10; 454(7201):141.
    View in: PubMed
    Score: 0.206
  14. Rando O. Oliver Rando: taking chromatin analysis to the genomic scale. Interview by Ruth Williams. J Cell Biol. 2007 Jun 18; 177(6):948-9.
    View in: PubMed
    Score: 0.191
  15. Rando OJ, Ahmad K. Rules and regulation in the primary structure of chromatin. Curr Opin Cell Biol. 2007 Jun; 19(3):250-6.
    View in: PubMed
    Score: 0.189
  16. Rando OJ. Chromatin structure in the genomics era. Trends Genet. 2007 Feb; 23(2):67-73.
    View in: PubMed
    Score: 0.185
  17. Rando OJ, Paulsson J. Noisy silencing of chromatin. Dev Cell. 2006 Aug; 11(2):134-6.
    View in: PubMed
    Score: 0.180
  18. Rando OJ, Chi TH, Crabtree GR. Second messenger control of chromatin remodeling. Nat Struct Biol. 2003 Feb; 10(2):81-3.
    View in: PubMed
    Score: 0.141
  19. Rando OJ, Zhao K, Janmey P, Crabtree GR. Phosphatidylinositol-dependent actin filament binding by the SWI/SNF-like BAF chromatin remodeling complex. Proc Natl Acad Sci U S A. 2002 Mar 05; 99(5):2824-9.
    View in: PubMed
    Score: 0.132
  20. Akgol Oksuz B, Yang L, Abraham S, Venev SV, Krietenstein N, Parsi KM, Ozadam H, Oomen ME, Nand A, Mao H, Genga RMJ, Maehr R, Rando OJ, Mirny LA, Gibcus JH, Dekker J. Systematic evaluation of chromosome conformation capture assays. Nat Methods. 2021 09; 18(9):1046-1055.
    View in: PubMed
    Score: 0.128
  21. Hsieh TS, Cattoglio C, Slobodyanyuk E, Hansen AS, Rando OJ, Tjian R, Darzacq X. Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding. Mol Cell. 2020 05 07; 78(3):539-553.e8.
    View in: PubMed
    Score: 0.116
  22. Krietenstein N, Abraham S, Venev SV, Abdennur N, Gibcus J, Hsieh TS, Parsi KM, Yang L, Maehr R, Mirny LA, Dekker J, Rando OJ. Ultrastructural Details of Mammalian Chromosome Architecture. Mol Cell. 2020 05 07; 78(3):554-565.e7.
    View in: PubMed
    Score: 0.116
  23. Hainer SJ, Bo?kovic A, McCannell KN, Rando OJ, Fazzio TG. Profiling of Pluripotency Factors in Single Cells and Early Embryos. Cell. 2019 05 16; 177(5):1319-1329.e11.
    View in: PubMed
    Score: 0.108
  24. Hamdani O, Dhillon N, Hsieh TS, Fujita T, Ocampo J, Kirkland JG, Lawrimore J, Kobayashi TJ, Friedman B, Fulton D, Wu KY, Chereji RV, Oki M, Bloom K, Clark DJ, Rando OJ, Kamakaka RT. tRNA Genes Affect Chromosome Structure and Function via Local Effects. Mol Cell Biol. 2019 04 15; 39(8).
    View in: PubMed
    Score: 0.108
  25. Swygert SG, Kim S, Wu X, Fu T, Hsieh TH, Rando OJ, Eisenman RN, Shendure J, McKnight JN, Tsukiyama T. Condensin-Dependent Chromatin Compaction Represses Transcription Globally during Quiescence. Mol Cell. 2019 02 07; 73(3):533-546.e4.
    View in: PubMed
    Score: 0.106
  26. Sharma U, Rando OJ. Metabolic Inputs into the Epigenome. Cell Metab. 2017 03 07; 25(3):544-558.
    View in: PubMed
    Score: 0.094
  27. Hsieh TS, Fudenberg G, Goloborodko A, Rando OJ. Micro-C XL: assaying chromosome conformation from the nucleosome to the entire genome. Nat Methods. 2016 Dec; 13(12):1009-1011.
    View in: PubMed
    Score: 0.091
  28. Rege M, Subramanian V, Zhu C, Hsieh TH, Weiner A, Friedman N, Clauder-M?nster S, Steinmetz LM, Rando OJ, Boyer LA, Peterson CL. Chromatin Dynamics and the RNA Exosome Function in Concert to Regulate Transcriptional Homeostasis. Cell Rep. 2015 Nov 24; 13(8):1610-22.
    View in: PubMed
    Score: 0.086
  29. Chen PB, Chen HV, Acharya D, Rando OJ, Fazzio TG. R loops regulate promoter-proximal chromatin architecture and cellular differentiation. Nat Struct Mol Biol. 2015 Dec; 22(12):999-1007.
    View in: PubMed
    Score: 0.085
  30. Friedman N, Rando OJ. Epigenomics and the structure of the living genome. Genome Res. 2015 Oct; 25(10):1482-90.
    View in: PubMed
    Score: 0.085
  31. Weiner A, Hsieh TH, Appleboim A, Chen HV, Rahat A, Amit I, Rando OJ, Friedman N. High-resolution chromatin dynamics during a yeast stress response. Mol Cell. 2015 Apr 16; 58(2):371-86.
    View in: PubMed
    Score: 0.082
  32. Ivanovska I, Jacques P?, Rando OJ, Robert F, Winston F. Control of chromatin structure by spt6: different consequences in coding and regulatory regions. Mol Cell Biol. 2011 Feb; 31(3):531-41.
    View in: PubMed
    Score: 0.061
  33. Weiner A, Hughes A, Yassour M, Rando OJ, Friedman N. High-resolution nucleosome mapping reveals transcription-dependent promoter packaging. Genome Res. 2010 Jan; 20(1):90-100.
    View in: PubMed
    Score: 0.056
  34. Radman-Livaja M, Rando OJ. Nucleosome positioning: how is it established, and why does it matter? Dev Biol. 2010 Mar 15; 339(2):258-66.
    View in: PubMed
    Score: 0.055
  35. Whitehouse I, Rando OJ, Delrow J, Tsukiyama T. Chromatin remodelling at promoters suppresses antisense transcription. Nature. 2007 Dec 13; 450(7172):1031-5.
    View in: PubMed
    Score: 0.049
  36. Dion MF, Kaplan T, Kim M, Buratowski S, Friedman N, Rando OJ. Dynamics of replication-independent histone turnover in budding yeast. Science. 2007 Mar 09; 315(5817):1405-8.
    View in: PubMed
    Score: 0.047
  37. Kassem S, Ferrari P, Hughes AL, Soudet J, Rando OJ, Strubin M. Histone exchange is associated with activator function at transcribed promoters and with repression at histone loci. Sci Adv. 2020 09; 6(36).
    View in: PubMed
    Score: 0.030
  38. Rando OJ, Zhao K, Crabtree GR. Searching for a function for nuclear actin. Trends Cell Biol. 2000 Mar; 10(3):92-7.
    View in: PubMed
    Score: 0.029
  39. Zhao K, Wang W, Rando OJ, Xue Y, Swiderek K, Kuo A, Crabtree GR. Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling. Cell. 1998 Nov 25; 95(5):625-36.
    View in: PubMed
    Score: 0.026
  40. Hainer SJ, McCannell KN, Yu J, Ee LS, Zhu LJ, Rando OJ, Fazzio TG. DNA methylation directs genomic localization of Mbd2 and Mbd3 in embryonic stem cells. Elife. 2016 11 16; 5.
    View in: PubMed
    Score: 0.023
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.