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Connection

Craig Martin to Transcription, Genetic

This is a "connection" page, showing publications Craig Martin has written about Transcription, Genetic.
Connection Strength

5.693
  1. Malagoda Pathiranage K, Martin CT. A simple approach to improving RNA synthesis: Salt inhibition of RNA rebinding coupled with strengthening promoter binding by a targeted gap in the DNA. Methods Enzymol. 2023; 691:209-222.
    View in: PubMed
    Score: 0.634
  2. MalagodaPathiranage K, Cavac E, Chen TH, Roy B, Martin CT. High-salt transcription from enzymatically gapped promoters nets higher yields and purity of transcribed RNAs. Nucleic Acids Res. 2023 04 11; 51(6):e36.
    View in: PubMed
    Score: 0.623
  3. Cavac E, Ram?rez-Tapia LE, Martin CT. High-salt transcription of DNA cotethered with T7 RNA polymerase to beads generates increased yields of highly pure RNA. J Biol Chem. 2021 09; 297(3):100999.
    View in: PubMed
    Score: 0.553
  4. Gholamalipour Y, Johnson WC, Martin CT. Efficient inhibition of RNA self-primed extension by addition of competing 3'-capture DNA-improved RNA synthesis by T7 RNA polymerase. Nucleic Acids Res. 2019 11 04; 47(19):e118.
    View in: PubMed
    Score: 0.491
  5. Gholamalipour Y, Karunanayake Mudiyanselage A, Martin CT. 3' end additions by T7 RNA polymerase are RNA self-templated, distributive and diverse in character-RNA-Seq analyses. Nucleic Acids Res. 2018 10 12; 46(18):9253-9263.
    View in: PubMed
    Score: 0.456
  6. Samanta S, Martin CT. Insights into the mechanism of initial transcription in Escherichia coli RNA polymerase. J Biol Chem. 2013 Nov 01; 288(44):31993-2003.
    View in: PubMed
    Score: 0.321
  7. Ram?rez-Tapia LE, Martin CT. New insights into the mechanism of initial transcription: the T7 RNA polymerase mutant P266L transitions to elongation at longer RNA lengths than wild type. J Biol Chem. 2012 Oct 26; 287(44):37352-61.
    View in: PubMed
    Score: 0.298
  8. Vahia AV, Martin CT. Direct tests of the energetic basis of abortive cycling in transcription. Biochemistry. 2011 Aug 16; 50(32):7015-22.
    View in: PubMed
    Score: 0.277
  9. Liu X, Martin CT. Transcription elongation complex stability: the topological lock. J Biol Chem. 2009 Dec 25; 284(52):36262-36270.
    View in: PubMed
    Score: 0.245
  10. Turingan RS, Theis K, Martin CT. Twisted or shifted? Fluorescence measurements of late intermediates in transcription initiation by T7 RNA polymerase. Biochemistry. 2007 May 29; 46(21):6165-8.
    View in: PubMed
    Score: 0.206
  11. Zhou Y, Martin CT. Observed instability of T7 RNA polymerase elongation complexes can be dominated by collision-induced "bumping". J Biol Chem. 2006 Aug 25; 281(34):24441-8.
    View in: PubMed
    Score: 0.195
  12. Gong P, Martin CT. Mechanism of instability in abortive cycling by T7 RNA polymerase. J Biol Chem. 2006 Aug 18; 281(33):23533-44.
    View in: PubMed
    Score: 0.194
  13. Theis K, Gong P, Martin CT. Topological and conformational analysis of the initiation and elongation complex of t7 RNA polymerase suggests a new twist. Biochemistry. 2004 Oct 12; 43(40):12709-15.
    View in: PubMed
    Score: 0.173
  14. MalagodaPathiranage K, Banerjee R, Martin CT. A new approach to RNA synthesis: immobilization of stably and functionally co-tethered promoter DNA and T7 RNA polymerase. Nucleic Acids Res. 2024 Sep 23; 52(17):10607-10618.
    View in: PubMed
    Score: 0.172
  15. Gong P, Esposito EA, Martin CT. Initial bubble collapse plays a key role in the transition to elongation in T7 RNA polymerase. J Biol Chem. 2004 Oct 22; 279(43):44277-85.
    View in: PubMed
    Score: 0.171
  16. Martin CT, Ujv?ri A, Liu C. Evaluation of fluorescence spectroscopy methods for mapping melted regions of DNA along the transcription pathway. Methods Enzymol. 2003; 371:13-33.
    View in: PubMed
    Score: 0.153
  17. Kuzmine I, Gottlieb PA, Martin CT. Binding of the priming nucleotide in the initiation of transcription by T7 RNA polymerase. J Biol Chem. 2003 Jan 31; 278(5):2819-23.
    View in: PubMed
    Score: 0.151
  18. Liu C, Martin CT. Promoter clearance by T7 RNA polymerase. Initial bubble collapse and transcript dissociation monitored by base analog fluorescence. J Biol Chem. 2002 Jan 25; 277(4):2725-31.
    View in: PubMed
    Score: 0.141
  19. Zhou Y, Navaroli DM, Enuameh MS, Martin CT. Dissociation of halted T7 RNA polymerase elongation complexes proceeds via a forward-translocation mechanism. Proc Natl Acad Sci U S A. 2007 Jun 19; 104(25):10352-7.
    View in: PubMed
    Score: 0.052
  20. Turingan RS, Liu C, Hawkins ME, Martin CT. Structural confirmation of a bent and open model for the initiation complex of T7 RNA polymerase. Biochemistry. 2007 Feb 20; 46(7):1714-23.
    View in: PubMed
    Score: 0.051
  21. Han G, Chari NS, Verma A, Hong R, Martin CT, Rotello VM. Controlled recovery of the transcription of nanoparticle-bound DNA by intracellular concentrations of glutathione. Bioconjug Chem. 2005 Nov-Dec; 16(6):1356-9.
    View in: PubMed
    Score: 0.047
  22. Martin CT, Esposito EA, Theis K, Gong P. Structure and function in promoter escape by T7 RNA polymerase. Prog Nucleic Acid Res Mol Biol. 2005; 80:323-47.
    View in: PubMed
    Score: 0.044
  23. Esposito EA, Martin CT. Cross-linking of promoter DNA to T7 RNA polymerase does not prevent formation of a stable elongation complex. J Biol Chem. 2004 Oct 22; 279(43):44270-6.
    View in: PubMed
    Score: 0.043
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.