Header Logo

Connection

Craig Peterson to Chromatin

Back to Details
This is a "connection" page, showing publications Craig Peterson has written about Chromatin.
Craig Peterson
Connection Strength
8.081
Chromatin
  1. Topal S, Van C, Xue Y, Carey MF, Peterson CL. INO80C Remodeler Maintains Genomic Stability by Preventing Promiscuous Transcription at Replication Origins. Cell Rep. 2020 09 08; 32(10):108106.
    View in: PubMed
    Score: 0.502
  2. Gioacchini N, Peterson CL. Chromatin remodeling: a complex affair. EMBO Rep. 2017 10; 18(10):1673-1674.
    View in: PubMed
    Score: 0.406
  3. Rege M, Subramanian V, Zhu C, Hsieh TH, Weiner A, Friedman N, Clauder-M?nster S, Steinmetz LM, Rando OJ, Boyer LA, Peterson CL. Chromatin Dynamics and the RNA Exosome Function in Concert to Regulate Transcriptional Homeostasis. Cell Rep. 2015 Nov 24; 13(8):1610-22.
    View in: PubMed
    Score: 0.359
  4. Van C, Williams JS, Kunkel TA, Peterson CL. Deposition of histone H2A.Z by the SWR-C remodeling enzyme prevents genome instability. DNA Repair (Amst). 2015 Jan; 25:9-14.
    View in: PubMed
    Score: 0.336
  5. Swygert SG, Peterson CL. Chromatin dynamics: interplay between remodeling enzymes and histone modifications. Biochim Biophys Acta. 2014 Aug; 1839(8):728-36.
    View in: PubMed
    Score: 0.319
  6. Peterson CL, Almouzni G. Nucleosome dynamics as modular systems that integrate DNA damage and repair. Cold Spring Harb Perspect Biol. 2013 Sep 01; 5(9).
    View in: PubMed
    Score: 0.308
  7. Papamichos-Chronakis M, Peterson CL. Chromatin and the genome integrity network. Nat Rev Genet. 2013 Jan; 14(1):62-75.
    View in: PubMed
    Score: 0.294
  8. Bennett G, Papamichos-Chronakis M, Peterson CL. DNA repair choice defines a common pathway for recruitment of chromatin regulators. Nat Commun. 2013; 4:2084.
    View in: PubMed
    Score: 0.294
  9. Peterson CL. Chromatin: a ubiquitin crowbar opens chromatin. Nat Chem Biol. 2011 Feb; 7(2):68-9.
    View in: PubMed
    Score: 0.258
  10. Oza P, Peterson CL. Opening the DNA repair toolbox: localization of DNA double strand breaks to the nuclear periphery. Cell Cycle. 2010 Jan 01; 9(1):43-9.
    View in: PubMed
    Score: 0.239
  11. Sinha M, Peterson CL. Chromatin dynamics during repair of chromosomal DNA double-strand breaks. Epigenomics. 2009 Dec; 1(2):371-85.
    View in: PubMed
    Score: 0.238
  12. Kundu S, Peterson CL. Role of chromatin states in transcriptional memory. Biochim Biophys Acta. 2009 Jun; 1790(6):445-55.
    View in: PubMed
    Score: 0.225
  13. Shogren-Knaak M, Peterson CL. Switching on chromatin: mechanistic role of histone H4-K16 acetylation. Cell Cycle. 2006 Jul; 5(13):1361-5.
    View in: PubMed
    Score: 0.188
  14. Shogren-Knaak M, Ishii H, Sun JM, Pazin MJ, Davie JR, Peterson CL. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science. 2006 Feb 10; 311(5762):844-7.
    View in: PubMed
    Score: 0.183
  15. Wolner B, Peterson CL. ATP-dependent and ATP-independent roles for the Rad54 chromatin remodeling enzyme during recombinational repair of a DNA double strand break. J Biol Chem. 2005 Mar 18; 280(11):10855-60.
    View in: PubMed
    Score: 0.170
  16. Smith CL, Peterson CL. ATP-dependent chromatin remodeling. Curr Top Dev Biol. 2005; 65:115-48.
    View in: PubMed
    Score: 0.169
  17. Peterson CL, Laniel MA. Histones and histone modifications. Curr Biol. 2004 Jul 27; 14(14):R546-51.
    View in: PubMed
    Score: 0.164
  18. Boyer LA, Latek RR, Peterson CL. The SANT domain: a unique histone-tail-binding module? Nat Rev Mol Cell Biol. 2004 Feb; 5(2):158-63.
    View in: PubMed
    Score: 0.159
  19. Jaskelioff M, Peterson CL. Chromatin and transcription: histones continue to make their marks. Nat Cell Biol. 2003 May; 5(5):395-9.
    View in: PubMed
    Score: 0.151
  20. Peterson CL. Transcriptional activation: getting a grip on condensed chromatin. Curr Biol. 2003 Mar 04; 13(5):R195-7.
    View in: PubMed
    Score: 0.149
  21. Smith CL, Horowitz-Scherer R, Flanagan JF, Woodcock CL, Peterson CL. Structural analysis of the yeast SWI/SNF chromatin remodeling complex. Nat Struct Biol. 2003 Feb; 10(2):141-5.
    View in: PubMed
    Score: 0.148
  22. Jaskelioff M, Van Komen S, Krebs JE, Sung P, Peterson CL. Rad54p is a chromatin remodeling enzyme required for heteroduplex DNA joint formation with chromatin. J Biol Chem. 2003 Mar 14; 278(11):9212-8.
    View in: PubMed
    Score: 0.147
  23. Boyer LA, Langer MR, Crowley KA, Tan S, Denu JM, Peterson CL. Essential role for the SANT domain in the functioning of multiple chromatin remodeling enzymes. Mol Cell. 2002 Oct; 10(4):935-42.
    View in: PubMed
    Score: 0.145
  24. Horn PJ, Peterson CL. Molecular biology. Chromatin higher order folding--wrapping up transcription. Science. 2002 Sep 13; 297(5588):1824-7.
    View in: PubMed
    Score: 0.144
  25. Peterson CL. HDAC's at work: everyone doing their part. Mol Cell. 2002 May; 9(5):921-2.
    View in: PubMed
    Score: 0.141
  26. Peterson CL. Chromatin remodeling: nucleosomes bulging at the seams. Curr Biol. 2002 Apr 02; 12(7):R245-7.
    View in: PubMed
    Score: 0.140
  27. Horn PJ, Carruthers LM, Logie C, Hill DA, Solomon MJ, Wade PA, Imbalzano AN, Hansen JC, Peterson CL. Phosphorylation of linker histones regulates ATP-dependent chromatin remodeling enzymes. Nat Struct Biol. 2002 Apr; 9(4):263-7.
    View in: PubMed
    Score: 0.140
  28. Peterson CL. Chromatin remodeling enzymes: taming the machines. Third in review series on chromatin dynamics. EMBO Rep. 2002 Apr; 3(4):319-22.
    View in: PubMed
    Score: 0.140
  29. Baier AS, Peterson CL. Fluorescence approaches for biochemical analysis of ATP-dependent chromatin remodeling enzymes. Methods Enzymol. 2022; 673:1-17.
    View in: PubMed
    Score: 0.140
  30. Fry CJ, Peterson CL. Transcription. Unlocking the gates to gene expression. Science. 2002 Mar 08; 295(5561):1847-8.
    View in: PubMed
    Score: 0.139
  31. Peterson CL. Chromatin: mysteries solved? Biochem Cell Biol. 2001; 79(3):219-25.
    View in: PubMed
    Score: 0.128
  32. Liu WH, Zheng J, Feldman JL, Klein MA, Kuznetsov VI, Peterson CL, Griffin PR, Denu JM. Multivalent interactions drive nucleosome binding and efficient chromatin deacetylation by SIRT6. Nat Commun. 2020 10 16; 11(1):5244.
    View in: PubMed
    Score: 0.126
  33. Peterson CL. ATP-dependent chromatin remodeling: going mobile. FEBS Lett. 2000 Jun 30; 476(1-2):68-72.
    View in: PubMed
    Score: 0.124
  34. Peterson CL, Logie C. Recruitment of chromatin remodeling machines. J Cell Biochem. 2000 May; 78(2):179-85.
    View in: PubMed
    Score: 0.122
  35. Peterson CL, Workman JL. Promoter targeting and chromatin remodeling by the SWI/SNF complex. Curr Opin Genet Dev. 2000 Apr; 10(2):187-92.
    View in: PubMed
    Score: 0.122
  36. Xue Y, Van C, Pradhan SK, Su T, Gehrke J, Kuryan BG, Kitada T, Vashisht A, Tran N, Wohlschlegel J, Peterson CL, Kurdistani SK, Carey MF. The Ino80 complex prevents invasion of euchromatin into silent chromatin. Genes Dev. 2015 Feb 15; 29(4):350-5.
    View in: PubMed
    Score: 0.085
  37. Adkins NL, Niu H, Sung P, Peterson CL. Nucleosome dynamics regulates DNA processing. Nat Struct Mol Biol. 2013 Jul; 20(7):836-42.
    View in: PubMed
    Score: 0.076
  38. Manning BJ, Peterson CL. Releasing the brakes on a chromatin-remodeling enzyme. Nat Struct Mol Biol. 2013 Jan; 20(1):5-7.
    View in: PubMed
    Score: 0.074
  39. Wippo CJ, Israel L, Watanabe S, Hochheimer A, Peterson CL, Korber P. The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes. EMBO J. 2011 Apr 06; 30(7):1277-88.
    View in: PubMed
    Score: 0.065
  40. Kundu S, Peterson CL. Dominant role for signal transduction in the transcriptional memory of yeast GAL genes. Mol Cell Biol. 2010 May; 30(10):2330-40.
    View in: PubMed
    Score: 0.061
  41. Carey MF, Peterson CL, Smale ST. Chromatin immunoprecipitation (ChIP). Cold Spring Harb Protoc. 2009 Sep; 2009(9):pdb.prot5279.
    View in: PubMed
    Score: 0.058
  42. Oza P, Jaspersen SL, Miele A, Dekker J, Peterson CL. Mechanisms that regulate localization of a DNA double-strand break to the nuclear periphery. Genes Dev. 2009 Apr 15; 23(8):912-27.
    View in: PubMed
    Score: 0.057
  43. Peterson CL. Purification of recombinant Drosophila ACF. Cold Spring Harb Protoc. 2009 Apr; 2009(4):pdb.prot5115.
    View in: PubMed
    Score: 0.057
  44. Peterson CL. Purification of recombinant Drosophila NAP1. Cold Spring Harb Protoc. 2009 Apr; 2009(4):pdb.prot5116.
    View in: PubMed
    Score: 0.057
  45. Sinha M, Peterson CL. A Rad51 presynaptic filament is sufficient to capture nucleosomal homology during recombinational repair of a DNA double-strand break. Mol Cell. 2008 Jun 20; 30(6):803-10.
    View in: PubMed
    Score: 0.054
  46. Papamichos-Chronakis M, Peterson CL. The Ino80 chromatin-remodeling enzyme regulates replisome function and stability. Nat Struct Mol Biol. 2008 Apr; 15(4):338-45.
    View in: PubMed
    Score: 0.053
  47. Fry CJ, Norris A, Cosgrove M, Boeke JD, Peterson CL. The LRS and SIN domains: two structurally equivalent but functionally distinct nucleosomal surfaces required for transcriptional silencing. Mol Cell Biol. 2006 Dec; 26(23):9045-59.
    View in: PubMed
    Score: 0.048
  48. Hill DA, Peterson CL, Imbalzano AN. Effects of HMGN1 on chromatin structure and SWI/SNF-mediated chromatin remodeling. J Biol Chem. 2005 Dec 16; 280(50):41777-83.
    View in: PubMed
    Score: 0.045
  49. Chio US, Rechiche O, Bryll AR, Zhu J, Leith EM, Feldman JL, Peterson CL, Tan S, Armache JP. Cryo-EM structure of the human Sirtuin 6-nucleosome complex. Sci Adv. 2023 04 14; 9(15):eadf7586.
    View in: PubMed
    Score: 0.038
  50. Gaillard H, Fitzgerald DJ, Smith CL, Peterson CL, Richmond TJ, Thoma F. Chromatin remodeling activities act on UV-damaged nucleosomes and modulate DNA damage accessibility to photolyase. J Biol Chem. 2003 May 16; 278(20):17655-63.
    View in: PubMed
    Score: 0.037
  51. Krietenstein N, Wal M, Watanabe S, Park B, Peterson CL, Pugh BF, Korber P. Genomic Nucleosome Organization Reconstituted with Pure Proteins. Cell. 2016 Oct 20; 167(3):709-721.e12.
    View in: PubMed
    Score: 0.024
  52. Jeronimo C, Watanabe S, Kaplan CD, Peterson CL, Robert F. The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations. Mol Cell. 2015 Jun 18; 58(6):1113-23.
    View in: PubMed
    Score: 0.022
  53. Langer MR, Fry CJ, Peterson CL, Denu JM. Modulating acetyl-CoA binding in the GCN5 family of histone acetyltransferases. J Biol Chem. 2002 Jul 26; 277(30):27337-44.
    View in: PubMed
    Score: 0.009
  54. Brower-Toland BD, Smith CL, Yeh RC, Lis JT, Peterson CL, Wang MD. Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA. Proc Natl Acad Sci U S A. 2002 Feb 19; 99(4):1960-5.
    View in: PubMed
    Score: 0.009
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.