Databases, Protein

"Databases, Protein" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure, which enables searching at various levels of specificity.

MeSH information

Definition | Details | More General Concepts | Related Concepts | More Specific Concepts

Databases containing information about PROTEINS such as AMINO ACID SEQUENCE; PROTEIN CONFORMATION; and other properties.

Descriptor ID	D030562
MeSH Number(s)	L01.313.500.750.300.188.400.300.750 L01.313.500.750.300.188.400.325.710 L01.470.750.750.300.750 L01.470.750.750.325.710
Concept/Terms	Databases, Protein Databases, Protein Database, Protein Protein Database Protein Databases SWISS-PROT SWISS-PROT SWISS PROT SwissProt Protein Sequence Databases Protein Sequence Databases Database, Protein Sequence Databases, Protein Sequence Protein Sequence Database Sequence Database, Protein Sequence Databases, Protein Databases, Amino Acid Sequence Amino Acid Sequence Databases Protein Structure Databases Protein Structure Databases Database, Protein Structure Databases, Protein Structure Protein Structure Database Structure Database, Protein Structure Databases, Protein

Below are MeSH descriptors whose meaning is more general than "Databases, Protein".

Information Science [L]
Information Science [L01]
Informatics [L01.313]
Medical Informatics [L01.313.500]
Medical Informatics Applications [L01.313.500.750]
Information Systems [L01.313.500.750.300]
Databases as Topic [L01.313.500.750.300.188]
Databases, Factual [L01.313.500.750.300.188.400]
Databases, Chemical [L01.313.500.750.300.188.400.300]
Databases, Protein [L01.313.500.750.300.188.400.300.750]
Databases, Genetic [L01.313.500.750.300.188.400.325]
Databases, Protein [L01.313.500.750.300.188.400.325.710]
Information Storage and Retrieval [L01.470]
Databases as Topic [L01.470.750]
Databases, Factual [L01.470.750.750]
Databases, Chemical [L01.470.750.750.300]
Databases, Protein [L01.470.750.750.300.750]
Databases, Genetic [L01.470.750.750.325]
Databases, Protein [L01.470.750.750.325.710]

Below are MeSH descriptors whose meaning is related to "Databases, Protein".

Below are MeSH descriptors whose meaning is more specific than "Databases, Protein".

publications

Timeline | Most Recent

This graph shows the total number of publications written about "Databases, Protein" by people in this website by year, and whether "Databases, Protein" was a major or minor topic of these publications.

Bar chart showing 40 publications over 18 distinct years, with a maximum of 5 publications in 2006

To see the data from this visualization as text, click here.

Year	Major Topic	Minor Topic	Total
2002	0	1	1
2003	2	0	2
2004	1	1	2
2005	0	2	2
2006	2	3	5
2007	1	0	1
2008	2	2	4
2009	0	2	2
2010	2	1	3
2011	0	2	2
2012	0	2	2
2013	0	4	4
2014	1	1	2
2016	0	2	2
2017	0	1	1
2018	0	1	1
2020	0	2	2
2021	2	0	2

Below are the most recent publications written about "Databases, Protein" by people in Profiles.

Gierasch LM, Berman HM. How the Protein Data Bank changed biology: An introduction to the JBC Reviews thematic series, part 2. J Biol Chem. 2021 Jan-Jun; 296:100748.

View in: PubMed
Berman HM, Gierasch LM. How the Protein Data Bank changed biology: An introduction to the JBC Reviews thematic series, part 1. J Biol Chem. 2021 Jan-Jun; 296:100608.

View in: PubMed
Ou J, Liu H, Nirala NK, Stukalov A, Acharya U, Green MR, Zhu LJ. dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data. PLoS One. 2020; 15(11):e0242030.

View in: PubMed
Chong C, M?ller M, Pak H, Harnett D, Huber F, Grun D, Leleu M, Auger A, Arnaud M, Stevenson BJ, Michaux J, Bilic I, Hirsekorn A, Calviello L, Sim?-Riudalbas L, Planet E, Lubinski J, Bryskiewicz M, Wiznerowicz M, Xenarios I, Zhang L, Trono D, Harari A, Ohler U, Coukos G, Bassani-Sternberg M. Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes. Nat Commun. 2020 03 10; 11(1):1293.

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Vreven T, Schweppe DK, Chavez JD, Weisbrod CR, Shibata S, Zheng C, Bruce JE, Weng Z. Integrating Cross-Linking Experiments with Ab Initio Protein-Protein Docking. J Mol Biol. 2018 06 08; 430(12):1814-1828.

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Olsen LR, Tongchusak S, Lin H, Reinherz EL, Brusic V, Zhang GL. TANTIGEN: a comprehensive database of tumor T cell antigens. Cancer Immunol Immunother. 2017 Jun; 66(6):731-735.

View in: PubMed
Vreven T, Pierce BG, Borrman TM, Weng Z. Performance of ZDOCK and IRAD in CAPRI rounds 28-34. Proteins. 2017 03; 85(3):408-416.

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Haldane A, Flynn WF, He P, Vijayan RS, Levy RM. Structural propensities of kinase family proteins from a Potts model of residue co-variation. Protein Sci. 2016 08; 25(8):1378-84.

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Kathuria SV, Chan YH, Nobrega RP, ?zen A, Matthews CR. Clusters of isoleucine, leucine, and valine side chains define cores of stability in high-energy states of globular proteins: Sequence determinants of structure and stability. Protein Sci. 2016 Mar; 25(3):662-75.

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Duan J, Ladd T, Doucet D, Cusson M, vanFrankenhuyzen K, Mittapalli O, Krell PJ, Quan G. Transcriptome Analysis of the Emerald Ash Borer (EAB), Agrilus planipennis: De Novo Assembly, Functional Annotation and Comparative Analysis. PLoS One. 2015; 10(8):e0134824.

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