Software

"Software" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure, which enables searching at various levels of specificity.

MeSH information

Definition | Details | More General Concepts | Related Concepts | More Specific Concepts

Sequential operating programs and data which instruct the functioning of a digital computer.

Descriptor ID	D012984
MeSH Number(s)	L01.224.900
Concept/Terms	Software Software Computer Software Software, Computer Computer Programs Computer Program Program, Computer Programs, Computer Software Tools Software Tools Software Tool Tool, Software Tools, Software Software Engineering Software Engineering Engineering, Software Computer Applications Software Computer Applications Software Applications Software, Computer Applications Softwares, Computer Computer Applications Softwares Software, Computer Applications Softwares, Computer Applications Computer Software Applications Application, Computer Software Applications, Computer Software Computer Software Application Software Application, Computer Software Applications, Computer Computer Programs and Programming Computer Programs and Programming

Below are MeSH descriptors whose meaning is more general than "Software".

Information Science [L]
Information Science [L01]
Computing Methodologies [L01.224]
Software [L01.224.900]

Below are MeSH descriptors whose meaning is related to "Software".

Below are MeSH descriptors whose meaning is more specific than "Software".

publications

Timeline | Most Recent

This graph shows the total number of publications written about "Software" by people in this website by year, and whether "Software" was a major or minor topic of these publications.

Bar chart showing 315 publications over 30 distinct years, with a maximum of 21 publications in 2015

To see the data from this visualization as text, click here.

Year	Major Topic	Minor Topic	Total
1995	1	1	2
1996	1	1	2
1998	0	1	1
1999	0	2	2
2000	1	4	5
2001	0	3	3
2002	0	6	6
2003	2	6	8
2004	3	6	9
2005	1	12	13
2006	7	7	14
2007	5	9	14
2008	2	9	11
2009	8	7	15
2010	5	12	17
2011	3	5	8
2012	9	7	16
2013	7	12	19
2014	15	4	19
2015	10	11	21
2016	5	8	13
2017	3	6	9
2018	4	8	12
2019	5	8	13
2020	10	9	19
2021	8	9	17
2022	1	2	3
2023	3	3	6
2024	5	4	9
2025	8	1	9

Below are the most recent publications written about "Software" by people in Profiles.

Rahman RU, Ahmad I, Li Z, Sparks RP, Ben Saad A, Mullen AC. Singletrome enhances detection of long noncoding RNAs in single cell transcriptomes. Sci Rep. 2025 Aug 12; 15(1):29542.

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Chen Y, Jarecka D, Abraham SA, Gau R, Ng E, Low DM, Bevers I, Johnson A, Keshavan A, Klein A, Clucas J, Rosli Z, Hodge SM, Linkersd?rfer J, Bartsch H, Das S, Fair D, Kennedy D, Ghosh SS. Standardizing Survey Data Collection to Enhance Reproducibility: Development and Comparative Evaluation of the ReproSchema Ecosystem. J Med Internet Res. 2025 Jul 11; 27:e63343.

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Elhaik E, Behnamian S, Howe M, Tang H, Yan H, Tian S, Shivaram S, Zepeda Mendoza C, MacLachlan K, Usmani S, Pirooznia M, Morgan G, Blaney P, Maura F, Baughn LB. AncestryGeni: a novel genetic ancestry classification pipeline for small and noisy sequence data. Bioinformatics. 2025 Jul 01; 41(7).

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Peng FZ, Wang C, Chen T, Schussheim B, Vincoff S, Chatterjee P. PTM-Mamba: a PTM-aware protein language model with bidirectional gated Mamba blocks. Nat Methods. 2025 May; 22(5):945-949.

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Laranjeira S, Guillemot-Legris O, Girmahun G, Phillips JB, Shipley RJ. Open-source software to calculate the static sciatic index automatically. Regen Med. 2025 Feb-Mar; 20(2-3):77-85.

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Seamann A, Bennett-Boehm M, Ehrlich R, Gil A, Selin L, Ghersi D. TRain: T-cell receptor automated immunoinformatics. BMC Bioinformatics. 2025 Mar 06; 26(1):76.

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Zhou P, Li Z, Liu F, Kwon E, Hsieh TC, Ye S, Vasudevan S, Lee JA, Tran KV, Zhou C. BAMBI integrates biostatistical and artificial intelligence methods to improve RNA biomarker discovery. Brief Bioinform. 2025 Mar 04; 26(2).

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Honeywell ME, Lee MJ. MEDUSA for Identifying Death Regulatory Genes in Chemo-genetic Profiling Data. J Vis Exp. 2025 Feb 07; (216).

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Teicher G, Riffe RM, Barnaby W, Martin G, Clayton BE, Trapani JG, Downes GB. Marigold: a machine learning-based web app for zebrafish pose tracking. BMC Bioinformatics. 2025 Jan 28; 26(1):30.

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Elferich J, Kong L, Zottig X, Grigorieff N. CTFFIND5 provides improved insight into quality, tilt, and thickness of TEM samples. Elife. 2024 Dec 20; 13.

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