Gastrointestinal Microbiome

"Gastrointestinal Microbiome" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure, which enables searching at various levels of specificity.

MeSH information

Definition | Details | More General Concepts | Related Concepts | More Specific Concepts

All of the microbial organisms that naturally exist within the GASTROINTESTINAL TRACT.

Descriptor ID	D000069196
MeSH Number(s)	G06.591.375 G16.500.275.157.049.100.500.375 N06.230.124.049.100.500.250
Concept/Terms	Gastrointestinal Microbiome Gastrointestinal Microbiome Gastrointestinal Microbiomes Microbiome, Gastrointestinal Microbiomes, Gastrointestinal Gut Microflora Microflora, Gut Gut Microbiota Gut Microbiotas Microbiota, Gut Microbiotas, Gut Gastrointestinal Flora Flora, Gastrointestinal Gut Flora Flora, Gut Gastrointestinal Microbiota Gastrointestinal Microbiotas Microbiota, Gastrointestinal Microbiotas, Gastrointestinal Gut Microbiome Gut Microbiomes Microbiome, Gut Microbiomes, Gut Gastrointestinal Microflora Microflora, Gastrointestinal Enteric Bacteria Enteric Bacteria Bacteria, Enteric Intestinal Microbiome Intestinal Microbiome Intestinal Microbiomes Microbiome, Intestinal Microbiomes, Intestinal Intestinal Microbiota Intestinal Microbiotas Microbiota, Intestinal Microbiotas, Intestinal Intestinal Microflora Microflora, Intestinal Intestinal Flora Flora, Intestinal

Below are MeSH descriptors whose meaning is more general than "Gastrointestinal Microbiome".

Biological Sciences [G]
Microbiological Phenomena [G06]
Microbiota [G06.591]
Gastrointestinal Microbiome [G06.591.375]
Biological Phenomena [G16]
Ecological and Environmental Phenomena [G16.500]
Environment [G16.500.275]
Ecosystem [G16.500.275.157]
Biodiversity [G16.500.275.157.049]
Biota [G16.500.275.157.049.100]
Microbiota [G16.500.275.157.049.100.500]
Gastrointestinal Microbiome [G16.500.275.157.049.100.500.375]
Health Care [N]
Environment and Public Health [N06]
Environment [N06.230]
Ecosystem [N06.230.124]
Biodiversity [N06.230.124.049]
Biota [N06.230.124.049.100]
Microbiota [N06.230.124.049.100.500]
Gastrointestinal Microbiome [N06.230.124.049.100.500.250]

Below are MeSH descriptors whose meaning is related to "Gastrointestinal Microbiome".

Below are MeSH descriptors whose meaning is more specific than "Gastrointestinal Microbiome".

publications

Timeline | Most Recent

This graph shows the total number of publications written about "Gastrointestinal Microbiome" by people in this website by year, and whether "Gastrointestinal Microbiome" was a major or minor topic of these publications.

Bar chart showing 193 publications over 12 distinct years, with a maximum of 31 publications in 2024

To see the data from this visualization as text, click here.

Year	Major Topic	Minor Topic	Total
2015	3	3	6
2016	5	0	5
2017	12	1	13
2018	7	4	11
2019	14	3	17
2020	16	7	23
2021	13	5	18
2022	17	2	19
2023	18	0	18
2024	26	5	31
2025	16	8	24
2026	7	1	8

Below are the most recent publications written about "Gastrointestinal Microbiome" by people in Profiles.

Zhan M, Zhao C, Chen B, Han Y, Song M, Cao Y, Xiao H. Crt-miR166a, a Citrus-Derived MicroRNA, Modulates the Gut Microbiota-Metabolites under High-Fat Diet. J Agric Food Chem. 2026 Jun 24; 74(24):18779-18790.

View in: PubMed
Zeamer AL, Lai Y, Loew E, Sanborn V, Tracy M, Jo C, Ferdinand D, Ward DV, Bhattarai SK, Drake J, McCormick BA, Bucci V, Haran JP. Microbiome functional gene pathways are indicative of cognitive performance in older adults at risk for Alzheimer's disease. Gut Microbes. 2026 Dec 31; 18(1):2676162.

View in: PubMed
Shepard DM, Hahn S, Chitre M, Neff H, Ward DV, Jadhav N, Richmond JM, Ramirez-Ortiz ZG. SCARF1 deficiency exacerbates gut inflammation and autoimmune pathology. Sci Rep. 2026 Feb 11; 16(1).

View in: PubMed
Zhan M, Zhao C, Han Y, Chen B, Chen Y, Song M, Cao Y, Xiao H. Citrus-Derived Exosome-like Nanoparticles Attenuate High-Fat Diet-Aggravated Colitis by Gut Microbiota-Metabolites Modulation. J Agric Food Chem. 2026 Feb 18; 74(6):5391-5404.

View in: PubMed
Dinesh D, Morgan XC, Kim H, Scott TM, Garelnabi M, Lee JS, Mangano KM, Nguyen LH, Huttenhower C, Tucker KL, Palacios N. Gut Microbial Variations Associated With Proton Pump Inhibitor Use in the Boston Puerto Rican Health Study. Pharmacol Res Perspect. 2026 Feb; 14(1):e70205.

View in: PubMed
Deng C, Zheng J, Xu F, Hong F, Zhan M, Chen Q, Peng Y, Cao Y, Xiao J, Liao Y, Xiao H, Song M. Processing-induced structural remodeling enhances the hypoglycemic activity of Polygonatum cyrtonema Hua polysaccharides via gut microbiota-SCFA-GPR41/43 pathway. Food Res Int. 2026 Apr 01; 229:118492.

View in: PubMed
Neff HA, Yildiz-Altay ?, Salam N, Ward DV, Shepard D, Ramirez-Ortiz ZG, Richmond JM. Gut dysbiosis in a murine model of cutaneous lupus erythematosus correlates with antigen-specific T cells and antigen-presenting cells in skin. Sci Rep. 2026 Jan 12; 16(1):4511.

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Chen X, Liang Z, Li S, Yan J, Du H, Qiu Z, Luo M, Leng X, Zhu J, Xiao H. Advances in Starch-Lipid-Protein Interactions in Starch-Based Food Systems: Bridging Structural Complexity With Functional Design. Compr Rev Food Sci Food Saf. 2026 01; 25(1):e70314.

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Chen Y, Luo M, Liu S, Zheng J, Song M, Du H, Tang Z, Xiao H. The In Vivo Metabolic Pathways of Nobiletin in Mice: The Critical Role of Gut Microbiota. J Agric Food Chem. 2026 Jan 14; 74(1):998-1008.

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Ye K, Fu C, Du H, Qiu Z, Chen S, Liu D, Ma G, Xiao H. Simulated Digestion and Metabolic Outcomes of Tremella fuciformis Polysaccharides and Their Effects on the Gut Microbiota. J Agric Food Chem. 2025 Dec 10; 73(49):31263-31273.

View in: PubMed

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