Transcriptome

"Transcriptome" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure, which enables searching at various levels of specificity.

MeSH information

Definition | Details | More General Concepts | Related Concepts | More Specific Concepts

The pattern of GENE EXPRESSION at the level of genetic transcription in a specific organism or under specific circumstances in specific cells.

Descriptor ID	D059467
MeSH Number(s)	G02.111.873.750 G05.297.700.750 G05.360.920
Concept/Terms	Transcriptome Transcriptome Transcriptomes Gene Expression Profiles Gene Expression Profiles Expression Profile, Gene Expression Profiles, Gene Gene Expression Profile Profile, Gene Expression Profiles, Gene Expression Transcriptome Profiles Profile, Transcriptome Profiles, Transcriptome Transcriptome Profile Gene Expression Signatures Expression Signature, Gene Expression Signatures, Gene Gene Expression Signature Signature, Gene Expression Signatures, Gene Expression

Below are MeSH descriptors whose meaning is more general than "Transcriptome".

Biological Sciences [G]
Chemical Phenomena [G02]
Biochemical Phenomena [G02.111]
Transcription, Genetic [G02.111.873]
Transcriptome [G02.111.873.750]
Genetic Phenomena [G05]
Gene Expression [G05.297]
Transcription, Genetic [G05.297.700]
Transcriptome [G05.297.700.750]
Genetic Structures [G05.360]
Transcriptome [G05.360.920]

Below are MeSH descriptors whose meaning is related to "Transcriptome".

Below are MeSH descriptors whose meaning is more specific than "Transcriptome".

publications

Timeline | Most Recent

This graph shows the total number of publications written about "Transcriptome" by people in this website by year, and whether "Transcriptome" was a major or minor topic of these publications.

Bar chart showing 290 publications over 16 distinct years, with a maximum of 29 publications in 2021

To see the data from this visualization as text, click here.

Year	Major Topic	Minor Topic	Total
2011	0	3	3
2012	5	5	10
2013	6	14	20
2014	6	9	15
2015	6	13	19
2016	11	10	21
2017	10	14	24
2018	8	14	22
2019	11	17	28
2020	12	14	26
2021	10	19	29
2022	6	13	19
2023	4	4	8
2024	5	11	16
2025	12	9	21
2026	6	3	9

Below are the most recent publications written about "Transcriptome" by people in Profiles.

Chakravorty A, Yun J, Amrhein H, Col?n KL, Sato T, Simons BD, Yoshida S, Cai L. The temporal architecture of the seminiferous epithelial cycle revealed by spatial transcriptomics. Cell. 2026 Jun 25; 189(13):4122-4139.e24.

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Carter JK, Quach BC, Willis C, Minto MS, Hancock DB, Montalvo-Ortiz J, Corradin O, Logan RW, Walss-Bass C, Maher BS, Johnson EO. Identifying novel gene dysregulation associated with opioid overdose death: a meta-analysis of differential gene expression in human prefrontal cortex. Transl Psychiatry. 2026 May 08; 16(1).

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Wang Y, Richmond JM, Almela RM. Comparison of human and canine atopic dermatitis transcriptome: A meta-analysis and review from a one health perspective. Res Vet Sci. 2026 Jul; 206:106194.

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Rao K, Rao Z, Huang A, Heston S, Wang M, Yildiz-Altay ?, Qutab F, Kwong DA, Gardner HL, Richmond JM, London CA. Peripheral blood mononuclear cell gene expression signatures predict long-term survivorship in canine DLBCL. Sci Rep. 2026 Mar 17; 16(1).

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Moyer AJ, Thyme SB. Gli3R-mediated inhibition of hedgehog signaling alters the embryonic transcriptome in zebrafish. G3 (Bethesda). 2026 03 04; 16(3).

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Guo C, Lan X, Huang C, Wang X, Zhang D, Zeng L, Wang Q, Xiang Y, Li J. Muscle-specific transcriptomic and metabolomic signatures reveal heterogeneous aging trajectories and altered intercellular communication in male murine skeletal muscle. Biogerontology. 2026 Feb 05; 27(2):48.

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Tang X, Liu L, Gao M, Duan P, Li S, Yuan Z, Xia Q, Xi L, Tan Y. Single-cell transcriptomics identifies fibroblast associated immune heterogeneity and prognostic signatures in bladder cancer. Sci Rep. 2026 Feb 03; 16(1):7151.

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Zhou H, Tyagi A, McClain M, Anguiano E, Abbondante S, Pearlman E, Gadjeva M. Protocol for dual spatial transcriptomic profiling of infected tissues. STAR Protoc. 2026 Mar 20; 7(1):104282.

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Tripathi S, Jul? AM, Zhuo Z, Schreiber BL, Martin-Moreno PL, Sui SH, Waaga-Gasser AM, Chandraker A. Single-cell and multi-omic characterization of ex vivo expanded ASTRLs from stable kidney transplant recipients reveals a regulatory T cell phenotype. Sci Rep. 2026 Jan 14; 16(1):3619.

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Freeman SR, Hayden JP, Hooper K, Sullivan T, Perrino C, Rieger-Christ K, Vanni AJ. Differential genetic expression in the tunica albuginea tissue of patients with Peyronie's disease. J Sex Med. 2026 01 05; 23(1).

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