Transcriptome

"Transcriptome" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure, which enables searching at various levels of specificity.

MeSH information

Definition | Details | More General Concepts | Related Concepts | More Specific Concepts

The pattern of GENE EXPRESSION at the level of genetic transcription in a specific organism or under specific circumstances in specific cells.

Descriptor ID	D059467
MeSH Number(s)	G02.111.873.750 G05.297.700.750 G05.360.920
Concept/Terms	Transcriptome Transcriptome Transcriptomes Gene Expression Profiles Gene Expression Profiles Expression Profile, Gene Expression Profiles, Gene Gene Expression Profile Profile, Gene Expression Profiles, Gene Expression Transcriptome Profiles Profile, Transcriptome Profiles, Transcriptome Transcriptome Profile Gene Expression Signatures Expression Signature, Gene Expression Signatures, Gene Gene Expression Signature Signature, Gene Expression Signatures, Gene Expression

Below are MeSH descriptors whose meaning is more general than "Transcriptome".

Biological Sciences [G]
Chemical Phenomena [G02]
Biochemical Phenomena [G02.111]
Transcription, Genetic [G02.111.873]
Transcriptome [G02.111.873.750]
Genetic Phenomena [G05]
Gene Expression [G05.297]
Transcription, Genetic [G05.297.700]
Transcriptome [G05.297.700.750]
Genetic Structures [G05.360]
Transcriptome [G05.360.920]

Below are MeSH descriptors whose meaning is related to "Transcriptome".

Below are MeSH descriptors whose meaning is more specific than "Transcriptome".

publications

Timeline | Most Recent

This graph shows the total number of publications written about "Transcriptome" by people in this website by year, and whether "Transcriptome" was a major or minor topic of these publications.

Bar chart showing 288 publications over 16 distinct years, with a maximum of 32 publications in 2021

To see the data from this visualization as text, click here.

Year	Major Topic	Minor Topic	Total
2011	0	3	3
2012	5	5	10
2013	6	13	19
2014	6	9	15
2015	6	12	18
2016	12	10	22
2017	10	14	24
2018	8	15	23
2019	12	17	29
2020	13	14	27
2021	13	19	32
2022	6	13	19
2023	5	4	9
2024	5	12	17
2025	10	8	18
2026	1	2	3

Below are the most recent publications written about "Transcriptome" by people in Profiles.

Guo C, Lan X, Huang C, Wang X, Zhang D, Zeng L, Wang Q, Xiang Y, Li J. Muscle-specific transcriptomic and metabolomic signatures reveal heterogeneous aging trajectories and altered intercellular communication in male murine skeletal muscle. Biogerontology. 2026 Feb 05; 27(2):48.

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Tripathi S, Jul? AM, Zhuo Z, Schreiber BL, Martin-Moreno PL, Sui SH, Waaga-Gasser AM, Chandraker A. Single-cell and multi-omic characterization of ex vivo expanded ASTRLs from stable kidney transplant recipients reveals a regulatory T cell phenotype. Sci Rep. 2026 Jan 14; 16(1):3619.

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Freeman SR, Hayden JP, Hooper K, Sullivan T, Perrino C, Rieger-Christ K, Vanni AJ. Differential genetic expression in the tunica albuginea tissue of patients with Peyronie's disease. J Sex Med. 2026 Jan 05; 23(1).

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Bellio TA, Krunic A, Campion MS, Dupaguntla R, Labadorf A, Stein TD, Lin H, Mellott TJ, Blusztajn JK. Perinatal Choline Supplementation Promotes Resilience Against Progression of Alzheimer's Disease-Like Brain Transcriptomic Signatures in AppNL-G-F Mice. Aging Cell. 2025 Nov; 24(11):e70148.

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Xu H, Gupta S, Dinsmore I, Kollu A, Cawley AM, Anwar MY, Chen HH, Petty LE, Seshadri S, Graff M, Below JE, Brody JA, Chittoor G, Fisher-Hoch SP, Heard-Costa NL, Levy D, Lin H, Loos RJF, Mccormick JB, Rotter JI, Mirshahi T, Still CD, Destefano A, Cupples LA, Mohlke KL, North KE, Justice AE, Liu CT. Integrating genetic and transcriptomic data to identify genes underlying obesity risk loci. Int J Obes (Lond). 2025 Nov; 49(11):2346-2357.

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Jeffries AM, Yu T, Ziegenfuss JS, Tolles AK, Baer CE, Sotelo CB, Kim Y, Weng Z, Lodato MA. Single-cell transcriptomic and genomic changes in the ageing human brain. Nature. 2025 10; 646(8085):657-666.

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Rahman RU, Ahmad I, Li Z, Sparks RP, Ben Saad A, Mullen AC. Singletrome enhances detection of long noncoding RNAs in single cell transcriptomes. Sci Rep. 2025 Aug 12; 15(1):29542.

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Gromova A, Cha B, Nguyen N, Garg D, Coscolluela C, Strickland LM, Luong D, Longo F, Sopher BL, ElMallah MK, La Spada AR. Neuromuscular junction transcriptome analysis of spinal and bulbar muscular atrophy mice implicates sarcomere gene expression and calcium flux dysregulation in disease pathogenesis. Hum Mol Genet. 2025 Jul 03; 34(14):1238-1251.

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Freitas AJA, Causin RL, Calfa S, Santana IVV, Balie M, Hirai W, Laus AC, Araujo HS, Hidalgo Filho CM, de Oliveira Bombarda F, da Silva VD, Evangelista AF, de P?dua Souza C, Reis RM, Marques MMC. Exploring the Nottingham classification: assessing gene expression profiles in breast cancer patients and their association with outcomes. Breast Cancer Res Treat. 2025 Jul; 212(2):237-250.

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Zhang H, Li X, Song D, Yukselen O, Nanda S, Kucukural A, Li JJ, Garber M, Walhout AJM. Worm Perturb-Seq: massively parallel whole-animal RNAi and RNA-seq. Nat Commun. 2025 May 23; 16(1):4785.

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