Below are the most recent publications written about "Phylogeny" by people in Profiles.
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Bendall EE, Fitzsimmons WJ, Valvano WD, Truscon R, Self WH, Halasa N, Chappell JD, Zhu Y, Safdar B, Ginde AA, Peltan ID, Gaglani M, Columbus C, Shapiro NI, Gibbs KW, Hager DN, Prekker ME, Mohamed A, Johnson NJ, Steingrub JS, Khan A, Duggal A, Wilson JG, Qadir N, Busse LW, Kwon JH, Exline MC, Vaughn IA, Mosier JM, Harris ES, Dawood FS, Ma KC, Surie D, Monto AS, Martin ET, Lauring AS. Genomic Surveillance of Human Metapneumovirus in the United States, 2010-2025. J Infect Dis. 2026 Sep 23; 234(3):e556-e565.
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Gedman GL, Pirovich KM, Oppenheimer J, Hyseni C, Cassatt-Johnstone M, Lucaci AG, Alexandre N, Troy W, Chao JC, Fedrigo O, Hoyt SJ, Grady PGS, Sacco S, Seligmann W, Dash A, Chokshi M, Knecht L, Papizan JB, Miyawaki T, Bocklandt S, Kelher J, Ord S, Gopalakrishnan S, Lin AT, Peecook BR, Perri A, Sinding MS, Larson G, Meachen J, Dalén L, vonHoldt B, Thomas P Gilbert M, Mason CE, O'Neill RJ, Karlsson EK, Cantarel BL, Martin GRR, Church G, Lamm B, Shapiro B. On the ancestry and evolution of the extinct dire wolf. Cell Genom. 2026 Aug 12; 6(8):101306.
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Tran TCG, Than TT, Lai TNH, Le HD, Nguyen TT, Vu ND, Ngo NBA, Nguyen HT, Nguyen PA, Goonewardene K, Ambagala A, Le VP. Emergence of Non-Hemadsorbing African Swine Fever Virus Genotype II Variants and the Evolution of a Vaccine-Derived Strain in Vietnam. Viruses. 2026 May 26; 18(6).
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Bourgikos E, Dellicour S, Lemey P, Feriancek NM, Bransfield AB, Breban MI, Misencik MJ, Petruff TA, Shepard JJ, Andreadis TG, Anderson JF, Ngo KA, Maffei JG, Dupuis AP, Rich SM, Xu G, Sakolsky G, Price KJ, Metzger ML, Suchard MA, Lopes R, Gámbaro F, Carlson CJ, Baele G, Ciota AT, Vogels CBF, Hill V, Armstrong PM, Grubaugh ND. Evolutionary history of Jamestown Canyon virus reveals complex multi-vector ecology. Curr Biol. 2026 May 04; 36(9):2343-2356.e7.
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Tully DC, Bean DJ, Sarette J, Ngo TL, Power KA, Brook D, Cooper H, Feinberg J, Friedmann PD, Hochstatter KR, Havens JR, Babalonis S, Hurt C, Jenkins W, Korthuis PT, Miller W, Pho MT, Smith G, Stopka TJ, Tsui JI, Mixson LS, Westergaard RP, Young AM, Allen TM. Genomic surveillance uncovers regional variation in HCV transmission networks in rural United States. Nat Commun. 2025 Dec 02; 17(1):249.
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Wu Z, Wu Y, Deng C, Xiao H, Wang S, Ye S, Zhao Y, Zhang Z. Novel roseophages provide insights into a genetically and ecologically diverse phage family. Microb Genom. 2025 11; 11(11).
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Titus MK, Giesbrecht D, Oduor CI, Muthoka K, Niaré K, Crudale R, Fola AA, Hui ST, Kim IE, Tonui PK, Itsura PM, Tonui R, Moormann AM, Loehrer PJ, Brown DR, Orang'o OE, Cu-Uvin S, Ermel AC, Katzenellenbogen RA, Bailey JA. Scalable long-read nanopore HPV16 amplicon-based whole-genome sequencing. Sci Rep. 2025 Oct 07; 15(1):34892.
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Margos G, Stevenson B, Birtles R, Gofton A, Talagrand-Reboul E, Goeker M, Fingerle V. Proposing a subgenus Borreliella. Ticks Tick Borne Dis. 2025 Sep; 16(5):102536.
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Pekar JE, Lytras S, Ghafari M, Magee AF, Parker E, Wang Y, Ji X, Havens JL, Katzourakis A, Vasylyeva TI, Suchard MA, Hughes AC, Hughes J, Rambaut A, Robertson DL, Dellicour S, Worobey M, Wertheim JO, Lemey P. The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2. Cell. 2025 Jun 12; 188(12):3167-3183.e18.
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Acevedo KL, Eaton E, Leite J, Zhao S, Chacon-Vargas K, McCarthy CM, Choi D, O'Donnell S, Gluck-Thaler E, Yu JH, Gibbons JG. Population Genomics of Aspergillus sojae is Shaped by the Food Environment. Genome Biol Evol. 2025 04 03; 17(4).